VPS35, chr16:46690054-46723430 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs60500837 chr16:46698387 VPS35 C - 8 A vs. G 0.175 (G) - <1 (-) 0 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs60500837 chr16:46698387 VPS35 C - 8 A vs. G 0.175 (G) - <1 (-) 0 (-) <0.05
rs59064826 chr16:46686281 VPS35 [-3773bp] C - 8 T vs. C 0.175 (T) - >1 (-) 0 (-) <0.05
rs28485103 chr16:46699553 VPS35 C - 9 A vs. G 0.175 (A) - >1 (-) 0 (-) <0.05
rs111681844 chr16:46695300 VPS35 C - 10 A vs. C - - >1 (-) 4 (-) <0.05
rs700582 chr16:46714529 VPS35 C - 10 A vs. G 0.183 (A) 0.008 (A) >1 (-) 5 (-) <0.05
rs36310 chr16:46705502 VPS35 C - 10 T vs. C 0.183 (T) 0.0 (T) >1 (-) 5 (-) <0.05
rs794279 chr16:46713692 VPS35 C - 10 T vs. C 0.183 (C) 0.0 (C) <1 (-) 6 (-) <0.05
rs36312 chr16:46718724 VPS35 C - 10 A vs. G 0.183 (G) 0.0 (G) <1 (-) 6 (-) <0.05
rs4966616 chr16:46705576 VPS35 C - 10 C vs. G 0.183 (G) - <1 (-) 6 (-) <0.05
rs67506574 chr16:46723994 ORC6 C - 10 T vs. G 0.183 (T) - >1 (-) 6 (-) <0.05
rs7190713 chr16:46719856 VPS35 C - 10 T vs. C 0.183 (C) - <1 (-) 6 (-) <0.05
rs72816873 chr16:46723370 VPS35 C - 7 A vs. C 0.1 (C) - <1 (-) 0 (-) <0.05
rs4966606 chr16:46675045 VPS35 [-15009bp] C - 9 A vs. G - - >1 (-) 19 (-) <0.05
rs41187 chr16:46728952 ORC6 C - 11 A vs. C 0.183 (A) 0.0 (A) >1 (-) 4 (-) <0.05
rs7205668 chr16:46666942 SHCBP1 [+11404bp] C - 9 A vs. T 0.133 (T) - <1 (-) 18 (-) <0.05
rs794277 chr16:46686718 VPS35 [-3336bp] C - 7 T vs. C - - <1 (-) 0 (-) <0.05
rs7186662 chr16:46640695 SHCBP1 C - 9 T vs. C 0.175 (C) - <1 (-) 17 (-) <0.05
rs8047226 chr16:46773124 MYLK3 C - 8 C vs. G - - >1 (-) 0 (-) <0.05
rs712816 chr16:46685634 VPS35 [-4420bp] C - 7 A vs. T 0.183 (T) - <1 (-) 0 (-) >0.05
rs183672 chr16:46699500 VPS35 C - 7 T vs. C 0.183 (C) - <1 (-) 0 (-) >0.05
rs2075157 chr16:46764374 MYLK3 C - 8 T vs. C 0.158 (T) 0.208 (T) <1 (-) 0 (-) >0.05
rs112216870 chr16:46769267 MYLK3 C - 13 A vs. G - - >1 (-) 11 (-) >0.05
rs12108950 chr16:46678109 VPS35 [-11945bp] C - 13 T vs. C - - >1 (-) 45 (-) >0.05
rs370159 chr16:46736263 ORC6 [+3957bp] C - 13 T vs. C 0.175 (C) 0.0 (C) <1 (-) 16 (-) >0.05
rs698416 chr16:46738418 MYLK3 [-2473bp] C - 13 T vs. C - - >1 (-) 16 (-) >0.05
rs112881913 chr16:46740354 MYLK3 [-537bp] C - 13 A vs. C 0.183 (A) - >1 (-) 15 (-) >0.05
rs72816877 chr16:46735305 ORC6 [+2999bp] C - 13 A vs. G 0.183 (A) - >1 (-) 17 (-) >0.05
rs4141491 chr16:46743675 MYLK3 C - 13 A vs. G 0.167 (G) 0.0 (G) <1 (-) 17 (-) >0.05
rs40163 chr16:46773080 MYLK3 C - 13 A vs. G 0.217 (A) 0.0 (A) >1 (-) 17 (-) >0.05
rs28174 chr16:46765146 MYLK3 C - 13 A vs. G 0.192 (G) 0.0 (G) <1 (-) 17 (-) >0.05
rs166161 chr16:46760715 MYLK3 C - 13 T vs. G 0.183 (G) 0.0 (G) <1 (-) 17 (-) >0.05
rs79994354 chr16:46662890 SHCBP1 [+7352bp] C - 6 T vs. G - - <1 (-) 0 (-) >0.05
rs36462 chr16:46770336 MYLK3 C - 13 C vs. G 0.208 (C) 0.0 (C) >1 (-) 14 (-) >0.05
rs2011677 chr16:46652003 SHCBP1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs252722 chr16:46759860 MYLK3 C - 13 A vs. G 0.192 (A) 0.0 (A) >1 (-) 15 (-) >0.05
rs17868285 chr16:46677656 VPS35 [-12398bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs252721 chr16:46760795 MYLK3 C - 13 A vs. G 0.192 (G) 0.0 (G) <1 (-) 15 (-) >0.05
rs11731313 chr16:46677784 VPS35 [-12270bp] C - 13 A vs. G - - <1 (-) 31 (-) >0.05
rs55786237 chr16:46677987 VPS35 [-12067bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12204380 chr16:46677767 VPS35 [-12287bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs62265331 chr16:46657347 SHCBP1 [+1809bp] C - 7 A vs. T - - <1 (-) 46 (-) >0.05
rs35313904 chr16:46644903 SHCBP1 C - 6 A vs. G 0.492 (G) 0.4 (G) <1 (-) 0 (-) >0.05
rs33994299 chr16:46723598 ORC6 C - 3 T vs. C 0.467 (C) 0.025 (C) <1 (-) 0 (-) >0.05
rs34738934 chr16:46710869 VPS35 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs13019213 chr16:46677817 VPS35 [-12237bp] C - 13 C vs. G - - <1 (-) 32 (-) >0.05
rs17734120 chr16:46648358 SHCBP1 C - 7 A vs. G 0.408 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs35845858 chr16:46703456 VPS35 C - 3 A vs. G 0.458 (A) 0.025 (A) >1 (-) 0 (-) >0.05
rs17728589 chr16:46642009 SHCBP1 C - 9 T vs. C 0.042 (T) - >1 (-) 0 (-) >0.05
rs17728559 chr16:46640592 SHCBP1 C - 9 T vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs3880396 chr16:46658857 SHCBP1 [+3319bp] C - 7 A vs. C - - >1 (-) 47 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.