TNFRSF9, chr1:7979907-8000926 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs145327785 chr1:7954306 TNFRSF9 [-25601bp] C - 10 A vs. G - - >1 (-) 41 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4908719 chr1:7952799 TNFRSF9 [-27108bp] C - 13 A vs. G 0.333 (A) - <1 (-) 0 (-) >0.05
rs1040396 chr1:7952404 TNFRSF9 [-27503bp] C - 13 C vs. G 0.333 (C) 0.075 (C) <1 (-) 0 (-) >0.05
rs4908718 chr1:7952760 TNFRSF9 [-27147bp] C - 13 T vs. C 0.333 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs138062076 chr1:7982018 TNFRSF9 C - 9 A vs. G - - >1 (-) 10 (-) >0.05
rs680522 chr1:7971301 TNFRSF9 [-8606bp] C - 13 A vs. G 0.4 (A) 0.092 (G) >1 (-) 12 (-) >0.05
rs679563 chr1:7971078 TNFRSF9 [-8829bp] C - 13 A vs. G 0.408 (A) 0.092 (G) >1 (-) 12 (-) >0.05
rs2131630 chr1:7990367 TNFRSF9 C - 13 A vs. G 0.4 (A) 0.383 (A) >1 (-) 0 (-) >0.05
rs1891598 chr1:7934154 UTS2 [+20582bp] C - 13 A vs. G 0.183 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs61772673 chr1:7969014 TNFRSF9 [-10893bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs150914 chr1:8015436 PARK7 C - 9 T vs. G - 0.433 (G) >1 (-) 0 (-) >0.05
rs11578133 chr1:7931458 UTS2 [+17886bp] C - 13 T vs. C 0.183 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs6703670 chr1:8030856 PARK7 C - 12 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs36040967 chr1:7931804 UTS2 [+18232bp] C - 13 A vs. G 0.2 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs863171 chr1:7992615 TNFRSF9 C - 13 T vs. C 0.4 (T) 0.383 (T) >1 (-) 0 (-) >0.05
rs225122 chr1:8047123 PARK7 [+1558bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs35267144 chr1:7934258 UTS2 [+20686bp] C - 13 A vs. G 0.2 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs225121 chr1:8046547 PARK7 [+982bp] C - 11 T vs. G - 0.458 (G) >1 (-) 0 (-) >0.05
rs2300428 chr1:7996894 TNFRSF9 C - 13 A vs. G 0.392 (G) 0.383 (G) <1 (-) 0 (-) >0.05
rs34472269 chr1:8033634 PARK7 C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs406809 chr1:8030415 PARK7 C - 11 A vs. G - 0.442 (A) <1 (-) 0 (-) >0.05
rs161808 chr1:8035714 PARK7 C - 11 T vs. C - 0.458 (T) <1 (-) 0 (-) >0.05
rs12025610 chr1:7963452 TNFRSF9 [-16455bp] C - 13 A vs. T 0.267 (T) 0.342 (A) >1 (-) 0 (-) >0.05
rs2284662 chr1:8042970 PARK7 C - 11 T vs. G - 0.475 (G) >1 (-) 0 (-) >0.05
rs585672 chr1:7973170 TNFRSF9 [-6737bp] C - 13 T vs. C 0.392 (C) 0.0 (C) >1 (-) 12 (-) >0.05
rs4562654 chr1:7934423 UTS2 [+20851bp] C - 13 A vs. T 0.192 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs161812 chr1:7999448 TNFRSF9 C - 13 A vs. G 0.4 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs744001 chr1:7934557 UTS2 [+20985bp] C - 13 A vs. G 0.2 (A) - <1 (-) 0 (-) >0.05
rs226478 chr1:7996634 TNFRSF9 C - 13 A vs. G 0.4 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs2172565 chr1:7973773 TNFRSF9 [-6134bp] C - 13 A vs. G 0.408 (A) 0.0 (A) <1 (-) 10 (-) >0.05
rs2453021 chr1:7989566 TNFRSF9 C - 13 T vs. C 0.317 (T) 0.308 (T) >1 (-) 15 (-) >0.05
rs17235507 chr1:7967187 TNFRSF9 [-12720bp] C - 13 A vs. G 0.158 (A) - <1 (-) 0 (-) >0.05
rs12046791 chr1:7936950 UTS2 [+23378bp] C - 13 A vs. G - - <1 (-) 1 (-) >0.05
rs150374865 chr1:8027611 PARK7 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs34990761 chr1:7937706 UTS2 [+24134bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4908708 chr1:7938113 UTS2 [+24541bp] C - 13 C vs. G 0.2 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs11121047 chr1:7952638 TNFRSF9 [-27269bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4908717 chr1:7952727 TNFRSF9 [-27180bp] C - 13 T vs. C 0.35 (T) 0.483 (T) <1 (-) 0 (-) >0.05
rs4908487 chr1:7937437 UTS2 [+23865bp] C - 13 T vs. C 0.2 (T) - <1 (-) 0 (-) >0.05
rs228711 chr1:7941198 UTS2 [+27626bp] C - 13 A vs. T 0.35 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs66692705 chr1:7938565 UTS2 [+24993bp] C - 13 T vs. C 0.208 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs12121408 chr1:7963072 TNFRSF9 [-16835bp] C - 13 T vs. C 0.242 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs179265 chr1:7942692 UTS2 [+29120bp] C - 13 T vs. G 0.458 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs12404752 chr1:7960863 TNFRSF9 [-19044bp] C - 13 A vs. G - 0.492 (G) >1 (-) 0 (-) >0.05
rs12403908 chr1:7960827 TNFRSF9 [-19080bp] C - 13 T vs. C 0.017 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs72633081 chr1:7964017 TNFRSF9 [-15890bp] C - 13 A vs. G 0.158 (A) - <1 (-) 0 (-) >0.05
rs75866446 chr1:7960828 TNFRSF9 [-19079bp] C - 13 A vs. G 0.017 (A) 0.425 (A) >1 (-) 0 (-) >0.05
rs78617231 chr1:7960883 TNFRSF9 [-19024bp] C - 13 T vs. C 0.017 (C) 0.492 (T) <1 (-) 0 (-) >0.05
rs1546846 chr1:8004259 TNFRSF9 [+3333bp] C - 13 T vs. C 0.383 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs227167 chr1:7951394 TNFRSF9 [-28513bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs228707 chr1:7941852 UTS2 [+28280bp] C - 13 T vs. G 0.367 (G) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.