TNFRSF9, chr1:7979907-8000926 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs145327785 chr1:7954306 TNFRSF9 [-25601bp] C - 10 A vs. G - - >1 (-) 41 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs145327785 chr1:7954306 TNFRSF9 [-25601bp] C - 10 A vs. G - - >1 (-) 41 (-) <0.05
rs146805058 chr1:8003632 TNFRSF9 [+2706bp] C - 3 A vs. G - - <1 (-) 0 (-) <0.05
rs138987053 chr1:7999092 TNFRSF9 C - 10 A vs. G - - <1 (-) 41 (-) <0.05
rs77711681 chr1:7942856 UTS2 [+29284bp] C - 10 C vs. G 0.025 (G) - <1 (-) 0 (-) <0.05
rs150902752 chr1:8029881 PARK7 C - 7 A vs. G - - >1 (-) 5 (-) <0.05
rs12028889 chr1:7963384 TNFRSF9 [-16523bp] C - 13 C vs. G - - <1 (-) 3 (-) <0.05
rs1102184 chr1:7932949 UTS2 [+19377bp] C - 13 A vs. G 0.292 (A) 0.233 (A) >1 (-) 0 (-) <0.05
rs227147 chr1:7955089 TNFRSF9 [-24818bp] C - 13 A vs. G 0.433 (G) 0.183 (A) <1 (-) 0 (-) >0.05
rs228702 chr1:7945520 UTS2 [+31948bp] C - 13 A vs. G 0.35 (A) 0.25 (G) >1 (-) 0 (-) >0.05
rs228710 chr1:7941218 UTS2 [+27646bp] C - 13 A vs. G 0.342 (G) 0.292 (A) <1 (-) 0 (-) >0.05
rs148870971 chr1:7961192 TNFRSF9 [-18715bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs228704 chr1:7944125 UTS2 [+30553bp] C - 13 T vs. C 0.325 (T) - >1 (-) 0 (-) >0.05
rs17235451 chr1:8001488 TNFRSF9 [+562bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs1040395 chr1:7952203 TNFRSF9 [-27704bp] C - 13 A vs. G 0.367 (A) 0.375 (A) >1 (-) 0 (-) >0.05
rs6688115 chr1:7932904 UTS2 [+19332bp] C - 13 T vs. C 0.383 (T) 0.267 (T) <1 (-) 0 (-) >0.05
rs6684933 chr1:7932990 UTS2 [+19418bp] C - 13 A vs. G 0.383 (G) 0.25 (G) >1 (-) 0 (-) >0.05
rs227160 chr1:7959048 TNFRSF9 [-20859bp] C - 13 A vs. G 0.483 (G) 0.133 (A) <1 (-) 0 (-) >0.05
rs228716 chr1:7936272 UTS2 [+22700bp] C - 13 T vs. G 0.408 (G) 0.267 (G) <1 (-) 0 (-) >0.05
rs129818 chr1:7934827 UTS2 [+21255bp] C - 13 A vs. C 0.408 (A) 0.275 (A) >1 (-) 0 (-) >0.05
rs228714 chr1:7938648 UTS2 [+25076bp] C - 13 A vs. G 0.425 (G) 0.25 (G) <1 (-) 0 (-) >0.05
rs228715 chr1:7938334 UTS2 [+24762bp] C - 13 A vs. G 0.408 (A) 0.267 (A) >1 (-) 0 (-) >0.05
rs228720 chr1:7933457 UTS2 [+19885bp] C - 13 A vs. G 0.408 (A) 0.275 (A) >1 (-) 0 (-) >0.05
rs228719 chr1:7934171 UTS2 [+20599bp] C - 13 A vs. G 0.408 (A) 0.275 (A) >1 (-) 0 (-) >0.05
rs12404597 chr1:7965367 TNFRSF9 [-14540bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs228724 chr1:7930554 UTS2 [+16982bp] C - 13 C vs. G 0.408 (C) 0.267 (C) >1 (-) 0 (-) >0.05
rs77604501 chr1:8040649 PARK7 C - 12 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs227163 chr1:7961206 TNFRSF9 [-18701bp] C - 13 T vs. C 0.458 (C) 0.333 (C) <1 (-) 0 (-) >0.05
rs75792501 chr1:7954065 TNFRSF9 [-25842bp] C - 5 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs11121046 chr1:7946009 UTS2 [+32437bp] C - 13 T vs. G 0.258 (G) - >1 (-) 0 (-) >0.05
rs227161 chr1:7960408 TNFRSF9 [-19499bp] C - 13 A vs. T 0.467 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs11121052 chr1:7968288 TNFRSF9 [-11619bp] C - 13 T vs. G - 0.342 (T) >1 (-) 0 (-) >0.05
rs4908721 chr1:7969309 TNFRSF9 [-10598bp] C - 13 T vs. G 0.475 (T) 0.333 (T) >1 (-) 0 (-) >0.05
rs113612855 chr1:8024453 PARK7 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs227162 chr1:7960565 TNFRSF9 [-19342bp] C - 13 T vs. G 0.483 (G) 0.15 (T) <1 (-) 0 (-) >0.05
rs228717 chr1:7935295 UTS2 [+21723bp] C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs9434959 chr1:8048142 PARK7 [+2577bp] C - 11 C vs. G - 0.475 (C) <1 (-) 0 (-) >0.05
rs184474 chr1:7954463 TNFRSF9 [-25444bp] C - 13 A vs. G 0.392 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs9803665 chr1:7953944 TNFRSF9 [-25963bp] C - 13 T vs. C 0.392 (C) 0.183 (C) >1 (-) 0 (-) >0.05
rs141355527 chr1:7969898 TNFRSF9 [-10009bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs9657993 chr1:7992095 TNFRSF9 C - 13 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs75353960 chr1:7953453 TNFRSF9 [-26454bp] C - 13 T vs. C 0.183 (T) - <1 (-) 1 (-) >0.05
rs170550 chr1:7954647 TNFRSF9 [-25260bp] C - 13 T vs. C 0.325 (T) 0.183 (T) <1 (-) 0 (-) >0.05
rs79415840 chr1:8018736 PARK7 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs1040397 chr1:7952427 TNFRSF9 [-27480bp] C - 13 A vs. G 0.333 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs150442886 chr1:7935315 UTS2 [+21743bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11121048 chr1:7958727 TNFRSF9 [-21180bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11584201 chr1:7958247 TNFRSF9 [-21660bp] C - 13 C vs. G 0.4 (G) - >1 (-) 0 (-) >0.05
rs1776354 chr1:7972201 TNFRSF9 [-7706bp] C - 13 A vs. G 0.342 (G) 0.35 (G) <1 (-) 15 (-) >0.05
rs72633055 chr1:7943319 UTS2 [+29747bp] C - 13 A vs. G 0.192 (A) - <1 (-) 0 (-) >0.05
rs325960 chr1:8025723 PARK7 C - 11 A vs. C - 0.433 (A) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.