THAP3, chr1:6684926-6695646 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2294528 chr1:6729749 DNAJC11 C - 12 A vs. G 0.358 (A) 0.442 (A) >1 (-) 12 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2294528 chr1:6729749 DNAJC11 C - 12 A vs. G 0.358 (A) 0.442 (A) >1 (-) 12 (-) <0.05
rs3789573 chr1:6730905 DNAJC11 C - 12 T vs. C 0.35 (C) 0.442 (C) <1 (-) 12 (-) <0.05
rs10864629 chr1:6686214 THAP3 C - 13 A vs. T 0.375 (T) 0.45 (T) <1 (-) 0 (-) <0.05
rs11892 chr1:6695331 THAP3 C - 13 T vs. G 0.35 (T) 0.442 (T) >1 (-) 8 (-) <0.05
rs12079872 chr1:6689824 THAP3 C - 13 A vs. G 0.367 (G) 0.45 (G) <1 (-) 9 (-) <0.05
rs12145525 chr1:6711146 DNAJC11 C - 13 T vs. C 0.367 (C) 0.442 (C) <1 (-) 23 (-) <0.05
rs56150786 chr1:6726269 DNAJC11 C - 12 T vs. C 0.042 (C) - <1 (-) 8 (-) <0.05
rs72636159 chr1:6744439 DNAJC11 C - 12 A vs. G 0.042 (A) - >1 (-) 20 (-) <0.05
rs12727844 chr1:6694207 THAP3 C - 13 A vs. G 0.367 (G) 0.45 (G) <1 (-) 10 (-) <0.05
rs3174820 chr1:6693097 THAP3 C - 13 A vs. G 0.35 (G) 0.433 (G) <1 (-) 9 (-) <0.05
rs6804 chr1:6694574 THAP3 C - 13 A vs. G 0.367 (A) 0.45 (A) >1 (-) 8 (-) <0.05
rs12127191 chr1:6685774 THAP3 C - 13 T vs. C 0.375 (T) 0.442 (T) >1 (-) 7 (-) <0.05
rs1556034 chr1:6689319 THAP3 C - 13 A vs. G 0.367 (A) 0.45 (A) >1 (-) 7 (-) <0.05
rs2076365 chr1:6705571 DNAJC11 C - 13 C vs. G 0.358 (G) 0.442 (G) <1 (-) 19 (-) <0.05
rs12137106 chr1:6708459 DNAJC11 C - 13 A vs. G - - >1 (-) 19 (-) <0.05
rs3789572 chr1:6732568 DNAJC11 C - 13 T vs. G 0.358 (T) 0.442 (T) >1 (-) 12 (-) <0.05
rs12745724 chr1:6719679 DNAJC11 C - 13 A vs. G - 0.433 (A) >1 (-) 15 (-) <0.05
rs35293685 chr1:6730782 DNAJC11 C - 10 T vs. C 0.008 (T) - >1 (-) 4 (-) <0.05
rs2294526 chr1:6735702 DNAJC11 C - 13 A vs. C 0.358 (A) 0.442 (A) >1 (-) 14 (-) <0.05
rs12137032 chr1:6708246 DNAJC11 C - 13 A vs. G - - >1 (-) 17 (-) <0.05
rs7549198 chr1:6709610 DNAJC11 C - 13 T vs. C 0.367 (C) 0.442 (C) <1 (-) 17 (-) <0.05
rs11122114 chr1:6714686 DNAJC11 C - 13 T vs. C 0.367 (T) 0.442 (T) >1 (-) 18 (-) <0.05
rs12755051 chr1:6718378 DNAJC11 C - 13 T vs. C 0.367 (T) 0.442 (T) >1 (-) 19 (-) <0.05
rs12126058 chr1:6744709 DNAJC11 C - 13 T vs. C 0.333 (T) 0.442 (T) >1 (-) 14 (-) <0.05
rs74049698 chr1:6684229 PHF13 [+136bp] C - 8 T vs. C - - >1 (-) 0 (-) <0.05
rs9661802 chr1:6678864 PHF13 C - 13 A vs. C - - <1 (-) 29 (-) <0.05
rs14057 chr1:6683240 PHF13 C - 12 A vs. G 0.367 (A) 0.4 (A) >1 (-) 23 (-) <0.05
rs10779795 chr1:6677064 PHF13 C - 13 A vs. G 0.35 (G) 0.408 (G) <1 (-) 30 (-) <0.05
rs11122105 chr1:6680907 PHF13 C - 13 A vs. G - - >1 (-) 30 (-) <0.05
rs2039054 chr1:6738880 DNAJC11 C - 13 T vs. C - - <1 (-) 17 (-) <0.05
rs60457384 chr1:6683192 PHF13 C - 7 T vs. C - - <1 (-) 0 (-) <0.05
rs55719565 chr1:6683134 PHF13 C - 7 T vs. C - - >1 (-) 0 (-) <0.05
rs6674407 chr1:6662913 KLHL21 C - 13 A vs. G 0.317 (A) 0.408 (A) >1 (-) 28 (-) <0.05
rs12034227 chr1:6681275 PHF13 C - 13 A vs. C 0.342 (C) 0.4 (C) <1 (-) 35 (-) <0.05
rs2235566 chr1:6655053 KLHL21 C - 13 A vs. G 0.342 (A) 0.417 (A) >1 (-) 29 (-) <0.05
rs731024 chr1:6644723 ZBTB48 C - 13 A vs. G 0.35 (A) 0.408 (A) >1 (-) 24 (-) <0.05
rs12124126 chr1:6660349 KLHL21 C - 13 A vs. G 0.342 (G) 0.4 (G) <1 (-) 31 (-) <0.05
rs12028517 chr1:6661732 KLHL21 C - 13 A vs. C 0.342 (A) 0.408 (A) >1 (-) 30 (-) <0.05
rs2232460 chr1:6659505 KLHL21 C - 13 A vs. G 0.342 (A) 0.417 (A) >1 (-) 29 (-) <0.05
rs55676837 chr1:6678516 PHF13 C - 7 A vs. G - - >1 (-) 0 (-) <0.05
rs2232461 chr1:6659445 KLHL21 C - 13 T vs. C - 0.025 (T) <1 (-) 0 (-) <0.05
rs201153 chr1:6731501 DNAJC11 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs78728410 chr1:6663031 KLHL21 C - 13 C vs. G 0.35 (C) - >1 (-) 28 (-) >0.05
rs113975767 chr1:6671549 KLHL21 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs112108919 chr1:6671399 KLHL21 C - 13 A vs. G - 0.033 (G) >1 (-) 0 (-) >0.05
rs112525331 chr1:6677536 PHF13 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs112962909 chr1:6677767 PHF13 C - 13 A vs. C - - <1 (-) 0 (-) >0.05
rs112617595 chr1:6678650 PHF13 C - 13 A vs. G 0.008 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs41310353 chr1:6651259 KLHL21 C - 12 T vs. C 0.008 (C) - >1 (-) 0 (-) >0.05
rs200446 chr1:6737870 DNAJC11 C - 13 A vs. G 0.442 (G) 0.442 (A) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.