PODN, chr1:53527854-53551174 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34107528 chr1:53537396 PODN C - 13 A vs. G 0.033 (A) - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77330574 chr1:53493820 SCP2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs6690936 chr1:53488092 SCP2 C - 13 T vs. G 0.067 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs6588455 chr1:53492657 SCP2 C - 13 A vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs60576668 chr1:53517349 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs77562670 chr1:53506133 SCP2 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs6675161 chr1:53487471 SCP2 C - 13 T vs. C - 0.075 (T) >1 (-) 11 (-) >0.05
rs17107648 chr1:53494781 SCP2 C - 13 T vs. C 0.067 (T) 0.35 (T) >1 (-) 0 (-) >0.05
rs3766762 chr1:53514516 SCP2 C - 13 T vs. C 0.033 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs77368772 chr1:53491039 SCP2 C - 13 A vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs60130096 chr1:53503202 SCP2 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs6588448 chr1:53485839 SCP2 C - 13 A vs. G 0.092 (G) - <1 (-) 2 (-) >0.05
rs3766764 chr1:53515305 SCP2 C - 13 A vs. G 0.058 (A) 0.317 (A) >1 (-) 0 (-) >0.05
rs17107702 chr1:53502877 SCP2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs148705313 chr1:53502810 SCP2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs6675803 chr1:53488129 SCP2 C - 13 C vs. G 0.067 (G) 0.342 (G) <1 (-) 0 (-) >0.05
rs61398052 chr1:53494514 SCP2 C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs61441285 chr1:53494516 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs10399937 chr1:53483431 SCP2 C - 13 T vs. C 0.083 (C) 0.392 (C) <1 (-) 0 (-) >0.05
rs6686866 chr1:53486378 SCP2 C - 13 T vs. C 0.067 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs17107693 chr1:53501456 SCP2 C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs6681542 chr1:53479892 SCP2 C - 13 T vs. C 0.033 (C) 0.083 (C) <1 (-) 11 (-) >0.05
rs17838020 chr1:53500798 SCP2 C - 12 A vs. T - - <1 (-) 0 (-) >0.05
rs72903182 chr1:53502660 SCP2 C - 13 A vs. G - - <1 (-) 12 (-) >0.05
rs7550236 chr1:53520126 SCP2 [+2751bp] C - 13 T vs. C 0.092 (C) 0.4 (C) <1 (-) 4 (-) >0.05
rs72905134 chr1:53518658 SCP2 [+1283bp] C - 13 A vs. G 0.075 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs12569270 chr1:53519795 SCP2 [+2420bp] C - 13 T vs. C 0.092 (C) 0.4 (C) <1 (-) 11 (-) >0.05
rs7512539 chr1:53489448 SCP2 C - 13 A vs. G 0.092 (A) 0.4 (A) >1 (-) 0 (-) >0.05
rs72905166 chr1:53531298 PODN C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs112105320 chr1:53501677 SCP2 C - 13 A vs. G - - >1 (-) 13 (-) >0.05
rs111849363 chr1:53495647 SCP2 C - 13 A vs. G - - <1 (-) 7 (-) >0.05
rs2275456 chr1:53536025 PODN C - 13 T vs. C 0.033 (C) 0.25 (C) <1 (-) 0 (-) >0.05
rs17107579 chr1:53482662 SCP2 C - 13 A vs. C 0.033 (C) 0.083 (C) <1 (-) 9 (-) >0.05
rs17107843 chr1:53538231 PODN C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs78344136 chr1:53536231 PODN C - 13 A vs. G - 0.25 (G) <1 (-) 0 (-) >0.05
rs10493172 chr1:53523904 PODN [-3950bp] C - 13 A vs. G 0.033 (G) 0.267 (G) <1 (-) 0 (-) >0.05
rs17107681 chr1:53498221 SCP2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs59611754 chr1:53536335 PODN C - 13 A vs. G 0.033 (G) 0.25 (G) <1 (-) 0 (-) >0.05
rs116005653 chr1:53555954 SLC1A7 C - 9 T vs. C 0.017 (T) - <1 (-) 37 (-) >0.05
rs59750828 chr1:53510126 SCP2 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs59926965 chr1:53536315 PODN C - 13 A vs. G - 0.25 (G) <1 (-) 0 (-) >0.05
rs10788948 chr1:53521486 SCP2 [+4111bp] C - 13 C vs. G 0.092 (C) 0.392 (C) >1 (-) 2 (-) >0.05
rs17107836 chr1:53536452 PODN C - 13 A vs. G 0.033 (G) 0.25 (G) <1 (-) 0 (-) >0.05
rs6662474 chr1:53499784 SCP2 C - 13 A vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs12092559 chr1:53584825 SLC1A7 C - 13 T vs. G 0.067 (T) - <1 (-) 0 (-) >0.05
rs11206083 chr1:53522317 SCP2 [+4942bp] C - 13 A vs. G - - <1 (-) 2 (-) >0.05
rs61005361 chr1:53500513 SCP2 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs3766788 chr1:53587701 SLC1A7 C - 13 A vs. G 0.067 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs7529260 chr1:53510822 SCP2 C - 13 A vs. G 0.033 (A) 0.083 (A) >1 (-) 12 (-) >0.05
rs148362086 chr1:53496351 SCP2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs17107724 chr1:53507145 SCP2 C - 13 T vs. C 0.033 (C) 0.092 (C) <1 (-) 13 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.