PODN, chr1:53527854-53551174 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34107528 chr1:53537396 PODN C - 13 A vs. G 0.033 (A) - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7516241 chr1:53571730 SLC1A7 C - 13 T vs. C - 0.225 (T) <1 (-) 0 (-) >0.05
rs1077467 chr1:53542533 PODN C - 11 T vs. G - 0.217 (T) >1 (-) 0 (-) >0.05
rs75990890 chr1:53557352 SLC1A7 C - 13 C vs. G - 0.242 (C) <1 (-) 0 (-) >0.05
rs899976 chr1:53593813 SLC1A7 C - 13 A vs. G 0.225 (A) 0.325 (A) >1 (-) 34 (-) >0.05
rs2306461 chr1:53556532 SLC1A7 C - 13 A vs. G - 0.225 (A) <1 (-) 0 (-) >0.05
rs899975 chr1:53593874 SLC1A7 C - 13 T vs. C 0.217 (T) 0.342 (T) >1 (-) 35 (-) >0.05
rs1299859 chr1:53596148 SLC1A7 C - 13 T vs. G 0.083 (T) - >1 (-) 0 (-) >0.05
rs3766794 chr1:53591463 SLC1A7 C - 13 A vs. G 0.133 (A) 0.233 (A) <1 (-) 44 (-) >0.05
rs138176438 chr1:53484241 SCP2 C - 4 A vs. C - - >1 (-) 0 (-) >0.05
rs58600784 chr1:53554736 SLC1A7 C - 13 T vs. C - 0.225 (T) <1 (-) 0 (-) >0.05
rs111850585 chr1:53574992 SLC1A7 C - 7 A vs. T - - <1 (-) 0 (-) >0.05
rs41294752 chr1:53551064 PODN C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs6666264 chr1:53586011 SLC1A7 C - 13 A vs. G 0.408 (A) 0.35 (G) >1 (-) 0 (-) >0.05
rs149865058 chr1:53499535 SCP2 C - 9 A vs. G - - <1 (-) 4 (-) >0.05
rs1288391 chr1:53545479 PODN C - 13 A vs. C 0.308 (C) 0.267 (A) <1 (-) 0 (-) >0.05
rs1383600 chr1:53591846 SLC1A7 C - 13 A vs. G 0.1 (G) 0.308 (G) <1 (-) 9 (-) >0.05
rs34203701 chr1:53573841 SLC1A7 C - 12 A vs. G 0.117 (A) - >1 (-) 0 (-) >0.05
rs6694834 chr1:53587179 SLC1A7 C - 13 T vs. C 0.417 (T) 0.35 (C) >1 (-) 0 (-) >0.05
rs1047741 chr1:53553069 SLC1A7 C - 13 A vs. G - 0.233 (A) <1 (-) 0 (-) >0.05
rs114400554 chr1:53477900 SCP2 C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs7556017 chr1:53582419 SLC1A7 C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs75287840 chr1:53567492 SLC1A7 C - 9 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs12095038 chr1:53561879 SLC1A7 C - 9 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs61768148 chr1:53589404 SLC1A7 C - 13 T vs. G 0.175 (T) 0.208 (T) <1 (-) 43 (-) >0.05
rs4130006 chr1:53488917 SCP2 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs4378148 chr1:53488916 SCP2 C - 13 A vs. G 0.067 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs72903117 chr1:53490682 SCP2 C - 13 A vs. G 0.067 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs6698146 chr1:53492917 SCP2 C - 13 A vs. G 0.05 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs72670860 chr1:53563266 SLC1A7 C - 12 C vs. G 0.125 (G) - >1 (-) 4 (-) >0.05
rs3766781 chr1:53579182 SLC1A7 C - 12 A vs. G 0.267 (A) 0.208 (A) <1 (-) 19 (-) >0.05
rs12240252 chr1:53593163 SLC1A7 C - 13 A vs. G 0.183 (A) 0.325 (A) >1 (-) 24 (-) >0.05
rs1288402 chr1:53555071 SLC1A7 C - 13 A vs. G 0.308 (G) 0.3 (A) <1 (-) 0 (-) >0.05
rs72670876 chr1:53594658 SLC1A7 C - 13 T vs. C - - <1 (-) 51 (-) >0.05
rs3766804 chr1:53594205 SLC1A7 C - 13 T vs. C 0.208 (C) 0.275 (C) >1 (-) 0 (-) >0.05
rs146556974 chr1:53499226 SCP2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs6687909 chr1:53547800 PODN C - 12 A vs. G - 0.233 (G) >1 (-) 24 (-) >0.05
rs72907026 chr1:53571834 SLC1A7 C - 6 T vs. C - - <1 (-) 36 (-) >0.05
rs72903173 chr1:53500694 SCP2 C - 13 A vs. G - - <1 (-) 24 (-) >0.05
rs10157941 chr1:53548986 PODN C - 13 C vs. G 0.275 (G) 0.217 (G) <1 (-) 4 (-) >0.05
rs17377317 chr1:53587022 SLC1A7 C - 12 T vs. C 0.017 (T) - >1 (-) 6 (-) >0.05
rs1288408 chr1:53558792 SLC1A7 C - 13 A vs. G 0.275 (G) 0.25 (G) <1 (-) 4 (-) >0.05
rs1288369 chr1:53575575 SLC1A7 C - 12 T vs. C 0.408 (T) 0.258 (T) <1 (-) 40 (-) >0.05
rs1288388 chr1:53544439 PODN C - 13 A vs. G 0.3 (G) 0.3 (A) <1 (-) 0 (-) >0.05
rs1288370 chr1:53576497 SLC1A7 C - 12 A vs. G 0.408 (A) 0.267 (A) <1 (-) 40 (-) >0.05
rs77433702 chr1:53566167 SLC1A7 C - 13 T vs. C 0.017 (T) 0.208 (T) >1 (-) 0 (-) >0.05
rs115644625 chr1:53566032 SLC1A7 C - 13 T vs. C 0.033 (C) - <1 (-) 0 (-) >0.05
rs74082782 chr1:53596099 SLC1A7 C - 13 T vs. C 0.083 (T) - >1 (-) 0 (-) >0.05
rs17107896 chr1:53552265 SLC1A7 [-590bp] C - 13 A vs. G - 0.233 (G) >1 (-) 0 (-) >0.05
rs17107817 chr1:53534357 PODN C - 13 T vs. C 0.033 (C) 0.25 (C) <1 (-) 0 (-) >0.05
rs57814160 chr1:53597481 SLC1A7 C - 13 A vs. G 0.167 (G) 0.3 (G) >1 (-) 50 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.