HP1BP3, chr1:21069154-21113816 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79364905 chr1:21088111 HP1BP3 C - 11 T vs. C 0.033 (C) - <1 (-) 39 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12409944 chr1:21023747 KIF17 C - 13 A vs. C 0.067 (A) 0.108 (A) <1 (-) 25 (-) >0.05
rs191580524 chr1:21143508 EIF4G3 C - 8 T vs. G - - >1 (-) 7 (-) >0.05
rs79994706 chr1:21052062 SH2D5 C - 13 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs698054 chr1:21041116 KIF17 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs11805169 chr1:21156862 EIF4G3 C - 13 A vs. T 0.342 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs61778530 chr1:21087363 HP1BP3 C - 13 C vs. G 0.317 (C) 0.033 (C) <1 (-) 0 (-) >0.05
rs12126786 chr1:21078692 HP1BP3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs76853579 chr1:21103387 HP1BP3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12404954 chr1:21074727 HP1BP3 C - 13 A vs. G 0.317 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs114401132 chr1:21049624 SH2D5 C - 13 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs143405103 chr1:21045514 SH2D5 [-711bp] C - 10 T vs. C - - >1 (-) 5 (-) >0.05
rs74462459 chr1:21081962 HP1BP3 C - 13 C vs. G 0.008 (C) - <1 (-) 0 (-) >0.05
rs7548269 chr1:21089472 HP1BP3 C - 13 T vs. C 0.317 (C) 0.025 (C) >1 (-) 0 (-) >0.05
rs12133972 chr1:21091338 HP1BP3 C - 13 A vs. T 0.3 (T) - >1 (-) 0 (-) >0.05
rs4654874 chr1:21156667 EIF4G3 C - 13 A vs. G 0.425 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs10753505 chr1:21118443 HP1BP3 [+4627bp] C - 13 T vs. C 0.025 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs12145203 chr1:21086127 HP1BP3 C - 13 T vs. C 0.317 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs683936 chr1:21022653 KIF17 C - 13 T vs. C 0.067 (T) 0.108 (T) <1 (-) 31 (-) >0.05
rs659046 chr1:21047725 SH2D5 C - 13 A vs. G 0.35 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs531044 chr1:21057011 SH2D5 C - 13 T vs. C 0.35 (T) 0.117 (T) >1 (-) 1 (-) >0.05
rs13376428 chr1:21120027 HP1BP3 [+6211bp] C - 13 T vs. C 0.408 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs935918 chr1:21145660 EIF4G3 C - 13 T vs. C 0.325 (T) - <1 (-) 0 (-) >0.05
rs4654868 chr1:21025139 KIF17 C - 13 T vs. C 0.058 (C) 0.1 (C) >1 (-) 29 (-) >0.05
rs10799665 chr1:21152640 EIF4G3 C - 13 A vs. G 0.325 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs710311 chr1:21062001 SH2D5 [+2671bp] C - 13 T vs. C 0.35 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs12736914 chr1:21027904 KIF17 C - 13 A vs. G - - >1 (-) 37 (-) >0.05
rs75434372 chr1:21023991 KIF17 C - 13 T vs. C 0.075 (C) 0.108 (C) >1 (-) 29 (-) >0.05
rs671905 chr1:21047092 SH2D5 C - 13 A vs. T 0.35 (A) 0.092 (A) >1 (-) 0 (-) >0.05
rs521424 chr1:21024743 KIF17 C - 13 A vs. G 0.433 (A) 0.367 (A) >1 (-) 15 (-) >0.05
rs12123093 chr1:21114416 HP1BP3 [+600bp] C - 13 T vs. C 0.3 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs646786 chr1:21054726 SH2D5 C - 13 A vs. G 0.35 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs80039892 chr1:21036781 KIF17 C - 13 T vs. C 0.1 (T) 0.217 (T) <1 (-) 39 (-) >0.05
rs75681827 chr1:21134041 EIF4G3 C - 9 T vs. C - - >1 (-) 12 (-) >0.05
rs6668591 chr1:21066557 HP1BP3 [-2597bp] C - 13 A vs. G 0.35 (G) - >1 (-) 0 (-) >0.05
rs78114834 chr1:21036532 KIF17 C - 13 T vs. C 0.1 (T) 0.217 (T) <1 (-) 40 (-) >0.05
rs34530426 chr1:21085204 HP1BP3 C - 13 T vs. C 0.4 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs1977296 chr1:21091543 HP1BP3 C - 13 T vs. G 0.417 (T) 0.158 (T) >1 (-) 0 (-) >0.05
rs6670897 chr1:21066376 HP1BP3 [-2778bp] C - 13 T vs. C 0.35 (C) 0.192 (C) >1 (-) 0 (-) >0.05
rs480676 chr1:21028647 KIF17 C - 11 T vs. G 0.217 (T) 0.233 (T) >1 (-) 46 (-) >0.05
rs12036633 chr1:21081119 HP1BP3 C - 13 A vs. G 0.033 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs3125161 chr1:21126346 EIF4G3 [-6617bp] C - 13 A vs. G 0.358 (A) 0.192 (A) <1 (-) 0 (-) >0.05
rs1408409 chr1:21089781 HP1BP3 C - 13 T vs. C 0.417 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs7552496 chr1:21085691 HP1BP3 C - 13 T vs. C - 0.167 (C) <1 (-) 0 (-) >0.05
rs6679753 chr1:21066634 HP1BP3 [-2520bp] C - 13 C vs. G 0.35 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs79135403 chr1:21153664 EIF4G3 C - 13 T vs. C 0.033 (T) - <1 (-) 9 (-) >0.05
rs116139439 chr1:21127228 EIF4G3 [-5735bp] C - 3 A vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs41302005 chr1:21024860 KIF17 C - 13 A vs. C 0.033 (A) - <1 (-) 36 (-) >0.05
rs2320590 chr1:21155195 EIF4G3 C - 13 T vs. C 0.442 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs12130841 chr1:21067051 HP1BP3 [-2103bp] C - 13 T vs. C 0.342 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs3736880 chr1:21097727 HP1BP3 C - 13 A vs. G 0.35 (A) 0.192 (A) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.