HP1BP3, chr1:21069154-21113816 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79364905 chr1:21088111 HP1BP3 C - 11 T vs. C 0.033 (C) - <1 (-) 39 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79364905 chr1:21088111 HP1BP3 C - 11 T vs. C 0.033 (C) - <1 (-) 39 (-) <0.05
rs34081829 chr1:21080938 HP1BP3 C - 13 A vs. T 0.05 (A) - >1 (-) 51 (-) <0.05
rs61778501 chr1:21027201 KIF17 C - 13 T vs. C 0.083 (T) - >1 (-) 54 (-) >0.05
rs12042868 chr1:21035578 KIF17 C - 13 T vs. G 0.192 (G) 0.483 (T) <1 (-) 31 (-) >0.05
rs61778504 chr1:21034646 KIF17 C - 13 T vs. C 0.1 (T) 0.1 (T) >1 (-) 59 (-) >0.05
rs12728802 chr1:21020868 KIF17 C - 13 T vs. C 0.133 (T) - >1 (-) 6 (-) >0.05
rs61778503 chr1:21033928 KIF17 C - 13 A vs. G 0.1 (A) 0.1 (A) >1 (-) 59 (-) >0.05
rs61778502 chr1:21031517 KIF17 C - 13 A vs. C 0.1 (A) 0.092 (A) >1 (-) 58 (-) >0.05
rs6683607 chr1:21029992 KIF17 C - 13 C vs. G - - <1 (-) 33 (-) >0.05
rs12745565 chr1:21024155 KIF17 C - 13 T vs. C 0.133 (T) - >1 (-) 9 (-) >0.05
rs61778505 chr1:21036836 KIF17 C - 13 A vs. G 0.108 (A) 0.092 (A) >1 (-) 58 (-) >0.05
rs17448349 chr1:21071419 HP1BP3 C - 13 A vs. G 0.067 (A) - >1 (-) 54 (-) >0.05
rs72652913 chr1:21151580 EIF4G3 C - 10 T vs. G 0.017 (T) - >1 (-) 0 (-) >0.05
rs12724604 chr1:21075458 HP1BP3 C - 13 A vs. G 0.05 (A) - >1 (-) 54 (-) >0.05
rs35895127 chr1:21125193 EIF4G3 [-7770bp] C - 13 A vs. G - - >1 (-) 54 (-) >0.05
rs12738072 chr1:21095337 HP1BP3 C - 13 C vs. G 0.067 (G) - <1 (-) 54 (-) >0.05
rs149048769 chr1:21049524 SH2D5 C - 4 A vs. G - - <1 (-) 62 (-) >0.05
rs75249585 chr1:21038556 KIF17 C - 13 T vs. C 0.1 (C) 0.1 (C) <1 (-) 58 (-) >0.05
rs12729575 chr1:21076274 HP1BP3 C - 13 A vs. G 0.067 (A) - >1 (-) 54 (-) >0.05
rs142791317 chr1:21078511 HP1BP3 C - 13 A vs. G - - >1 (-) 54 (-) >0.05
rs12753144 chr1:21081278 HP1BP3 C - 13 T vs. C 0.067 (C) - <1 (-) 54 (-) >0.05
rs36051242 chr1:21082823 HP1BP3 C - 13 A vs. T 0.067 (A) - >1 (-) 54 (-) >0.05
rs67571911 chr1:21116536 HP1BP3 [+2720bp] C - 13 A vs. G 0.067 (G) - <1 (-) 54 (-) >0.05
rs17408061 chr1:21070238 HP1BP3 C - 13 T vs. C 0.067 (C) - <1 (-) 54 (-) >0.05
rs35833017 chr1:21089999 HP1BP3 C - 13 A vs. C 0.067 (C) - <1 (-) 54 (-) >0.05
rs67190425 chr1:21088216 HP1BP3 C - 13 A vs. G 0.067 (G) - <1 (-) 54 (-) >0.05
rs17408347 chr1:21098639 HP1BP3 C - 13 T vs. C 0.067 (T) - >1 (-) 54 (-) >0.05
rs34126513 chr1:21132778 EIF4G3 [-185bp] C - 13 A vs. T 0.067 (A) - >1 (-) 54 (-) >0.05
rs72650901 chr1:21096114 HP1BP3 C - 13 C vs. G 0.067 (C) - >1 (-) 54 (-) >0.05
rs17408249 chr1:21097584 HP1BP3 C - 13 A vs. T 0.067 (T) - <1 (-) 54 (-) >0.05
rs35767045 chr1:21114392 HP1BP3 [+576bp] C - 13 C vs. G 0.067 (G) - <1 (-) 54 (-) >0.05
rs33936601 chr1:21106416 HP1BP3 C - 13 C vs. G 0.067 (C) - >1 (-) 54 (-) >0.05
rs35983948 chr1:21121199 HP1BP3 [+7383bp] C - 13 A vs. G - - >1 (-) 53 (-) >0.05
rs71647170 chr1:21146980 EIF4G3 C - 13 C vs. G 0.067 (G) - <1 (-) 50 (-) >0.05
rs66644272 chr1:21149953 EIF4G3 C - 13 T vs. C 0.067 (T) - >1 (-) 50 (-) >0.05
rs12727835 chr1:21093714 HP1BP3 C - 13 T vs. C - - >1 (-) 51 (-) >0.05
rs111926833 chr1:21029696 KIF17 C - 13 T vs. C 0.05 (C) - <1 (-) 48 (-) >0.05
rs12118408 chr1:21034084 KIF17 C - 13 T vs. C 0.492 (T) 0.1 (T) <1 (-) 0 (-) >0.05
rs12743389 chr1:21059570 SH2D5 [+240bp] C - 13 T vs. G 0.067 (T) - >1 (-) 43 (-) >0.05
rs35933697 chr1:21062960 SH2D5 [+3630bp] C - 13 A vs. G - - >1 (-) 53 (-) >0.05
rs72650888 chr1:21063128 SH2D5 [+3798bp] C - 13 A vs. G 0.067 (A) - >1 (-) 53 (-) >0.05
rs12739943 chr1:21023010 KIF17 C - 13 T vs. C 0.133 (T) - >1 (-) 9 (-) >0.05
rs61778523 chr1:21042157 KIF17 C - 13 T vs. C 0.092 (T) 0.092 (T) >1 (-) 57 (-) >0.05
rs17449126 chr1:21157305 EIF4G3 C - 13 T vs. C 0.075 (C) - <1 (-) 49 (-) >0.05
rs34126615 chr1:21042115 KIF17 C - 13 A vs. G 0.05 (A) - >1 (-) 41 (-) >0.05
rs115269315 chr1:21100876 HP1BP3 C - 13 T vs. C 0.042 (T) - <1 (-) 49 (-) >0.05
rs3738144 chr1:21047404 SH2D5 C - 13 A vs. G 0.1 (G) 0.108 (G) <1 (-) 56 (-) >0.05
rs12723152 chr1:21064935 HP1BP3 [-4219bp] C - 13 T vs. C 0.05 (C) - <1 (-) 51 (-) >0.05
rs12758826 chr1:21162380 EIF4G3 C - 13 T vs. C 0.067 (T) - >1 (-) 49 (-) >0.05
rs2076856 chr1:21021175 KIF17 C - 10 A vs. G - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.