HP1BP3, chr1:21069154-21113816 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79364905 chr1:21088111 HP1BP3 C - 11 T vs. C 0.033 (C) - <1 (-) 39 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs495522 chr1:21105994 HP1BP3 C - 13 T vs. C 0.383 (C) 0.1 (C) <1 (-) 7 (-) >0.05
rs12757034 chr1:21026501 KIF17 C - 13 C vs. G 0.05 (G) - <1 (-) 32 (-) >0.05
rs541464 chr1:21067095 HP1BP3 [-2059bp] C - 13 T vs. C 0.417 (C) 0.1 (C) <1 (-) 6 (-) >0.05
rs601392 chr1:21044219 KIF17 C - 13 A vs. C 0.225 (A) - >1 (-) 0 (-) >0.05
rs77401417 chr1:21077110 HP1BP3 C - 13 A vs. G 0.033 (A) 0.083 (A) >1 (-) 38 (-) >0.05
rs80124376 chr1:21077106 HP1BP3 C - 13 A vs. T 0.033 (A) - >1 (-) 38 (-) >0.05
rs1152999 chr1:21123023 HP1BP3 [+9207bp] C - 13 T vs. C 0.333 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs519209 chr1:21043790 KIF17 C - 13 T vs. C 0.408 (T) 0.175 (T) >1 (-) 11 (-) >0.05
rs76504397 chr1:21061718 SH2D5 [+2388bp] C - 13 T vs. C 0.033 (T) 0.15 (T) >1 (-) 22 (-) >0.05
rs12023041 chr1:21056753 SH2D5 C - 13 A vs. G 0.133 (A) 0.325 (G) <1 (-) 21 (-) >0.05
rs61778528 chr1:21059837 SH2D5 [+507bp] C - 13 T vs. C 0.308 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs77560484 chr1:21147360 EIF4G3 C - 11 A vs. C 0.033 (C) 0.158 (C) <1 (-) 22 (-) >0.05
rs667687 chr1:21072577 HP1BP3 C - 13 A vs. G 0.417 (A) 0.117 (A) >1 (-) 7 (-) >0.05
rs116064032 chr1:21146948 EIF4G3 C - 11 T vs. C 0.025 (C) 0.158 (C) <1 (-) 23 (-) >0.05
rs1985278 chr1:21091861 HP1BP3 C - 12 T vs. G 0.417 (T) 0.117 (T) >1 (-) 19 (-) >0.05
rs609880 chr1:21055891 SH2D5 C - 13 A vs. G 0.35 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs951805 chr1:21060356 SH2D5 [+1026bp] C - 13 A vs. G 0.317 (A) 0.033 (A) <1 (-) 0 (-) >0.05
rs12022873 chr1:21046569 SH2D5 C - 13 A vs. G 0.133 (A) 0.342 (G) <1 (-) 23 (-) >0.05
rs114520760 chr1:21046193 SH2D5 [-32bp] C - 8 T vs. C - 0.058 (T) >1 (-) 0 (-) >0.05
rs3121071 chr1:21128420 EIF4G3 [-4543bp] C - 13 T vs. C 0.442 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs900037 chr1:21057788 SH2D5 C - 13 T vs. C 0.133 (T) 0.325 (C) <1 (-) 19 (-) >0.05
rs733581 chr1:21054788 SH2D5 C - 8 A vs. G - 0.058 (G) <1 (-) 0 (-) >0.05
rs12030051 chr1:21134597 EIF4G3 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs679851 chr1:21021773 KIF17 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs599604 chr1:21020313 KIF17 C - 13 T vs. C 0.483 (T) 0.233 (T) <1 (-) 7 (-) >0.05
rs10916853 chr1:21053887 SH2D5 C - 13 T vs. C 0.133 (T) 0.333 (C) <1 (-) 21 (-) >0.05
rs6668854 chr1:21045508 SH2D5 [-717bp] C - 13 A vs. C 0.133 (A) 0.342 (C) <1 (-) 24 (-) >0.05
rs34821077 chr1:21027285 KIF17 C - 13 A vs. C 0.05 (C) - <1 (-) 32 (-) >0.05
rs74058986 chr1:21026239 KIF17 C - 10 T vs. C 0.167 (T) - <1 (-) 0 (-) >0.05
rs2100382 chr1:21146422 EIF4G3 C - 13 A vs. G 0.4 (A) 0.5 (A) >1 (-) 0 (-) >0.05
rs602166 chr1:21023881 KIF17 C - 13 T vs. G - - <1 (-) 5 (-) >0.05
rs60900314 chr1:21038428 KIF17 C - 13 T vs. C 0.1 (C) 0.208 (C) >1 (-) 37 (-) >0.05
rs41307866 chr1:21040088 KIF17 C - 13 T vs. C 0.1 (T) 0.267 (T) <1 (-) 38 (-) >0.05
rs76722220 chr1:21066996 HP1BP3 [-2158bp] C - 12 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
rs58464781 chr1:21051430 SH2D5 C - 13 A vs. C 0.133 (A) 0.35 (C) <1 (-) 21 (-) >0.05
rs74549902 chr1:21061611 SH2D5 [+2281bp] C - 13 A vs. G - - >1 (-) 8 (-) >0.05
rs12403580 chr1:21049518 SH2D5 C - 13 T vs. C 0.133 (T) 0.342 (C) <1 (-) 22 (-) >0.05
rs74840517 chr1:21049848 SH2D5 C - 13 A vs. G 0.133 (A) 0.342 (G) <1 (-) 21 (-) >0.05
rs590454 chr1:21023603 KIF17 C - 13 T vs. C 0.483 (T) 0.192 (T) <1 (-) 6 (-) >0.05
rs900038 chr1:21057552 SH2D5 C - 13 A vs. C 0.133 (A) 0.325 (C) <1 (-) 14 (-) >0.05
rs674081 chr1:21023145 KIF17 C - 13 A vs. G 0.483 (G) 0.2 (G) >1 (-) 4 (-) >0.05
rs570563 chr1:21022701 KIF17 C - 13 T vs. C 0.492 (T) 0.192 (T) <1 (-) 4 (-) >0.05
rs12046928 chr1:21042094 KIF17 C - 13 A vs. G 0.1 (A) 0.317 (G) <1 (-) 21 (-) >0.05
rs535696 chr1:21021198 KIF17 C - 13 T vs. C 0.483 (C) 0.225 (C) >1 (-) 5 (-) >0.05
rs10916855 chr1:21056382 SH2D5 C - 13 T vs. C 0.358 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs150815851 chr1:21091417 HP1BP3 C - 12 T vs. C - - <1 (-) 50 (-) >0.05
rs12093772 chr1:21029232 KIF17 C - 13 T vs. C 0.442 (C) 0.167 (C) <1 (-) 0 (-) >0.05
rs72650881 chr1:21034596 KIF17 C - 13 T vs. C 0.083 (T) 0.033 (T) <1 (-) 13 (-) >0.05
rs72650882 chr1:21040310 KIF17 C - 13 T vs. C 0.025 (C) - >1 (-) 27 (-) >0.05
rs75505577 chr1:21145379 EIF4G3 C - 3 A vs. G 0.025 (A) - <1 (-) 50 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.