HP1BP3, chr1:21069154-21113816 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79364905 chr1:21088111 HP1BP3 C - 11 T vs. C 0.033 (C) - <1 (-) 39 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs752555 chr1:21032041 KIF17 C - 13 A vs. G 0.308 (G) 0.258 (G) <1 (-) 33 (-) >0.05
rs586924 chr1:21043302 KIF17 C - 13 T vs. C 0.492 (T) 0.267 (C) <1 (-) 0 (-) >0.05
rs3753046 chr1:21050400 SH2D5 C - 13 A vs. T 0.108 (T) 0.108 (T) <1 (-) 56 (-) >0.05
rs75668570 chr1:21059127 SH2D5 C - 13 A vs. T 0.05 (A) - >1 (-) 44 (-) >0.05
rs60962147 chr1:21022092 KIF17 C - 13 T vs. C 0.233 (T) 0.2 (T) >1 (-) 47 (-) >0.05
rs10916852 chr1:21052693 SH2D5 C - 13 T vs. G 0.1 (T) 0.083 (T) >1 (-) 54 (-) >0.05
rs80057852 chr1:21053295 SH2D5 C - 13 T vs. G 0.108 (T) 0.1 (T) >1 (-) 54 (-) >0.05
rs17407755 chr1:21046579 SH2D5 C - 13 A vs. G 0.067 (G) - <1 (-) 46 (-) >0.05
rs41265093 chr1:21092064 HP1BP3 C - 11 A vs. G 0.017 (A) - >1 (-) 53 (-) >0.05
rs76298514 chr1:21078282 HP1BP3 C - 13 T vs. C 0.05 (C) - <1 (-) 55 (-) >0.05
rs17408019 chr1:21067688 HP1BP3 [-1466bp] C - 13 C vs. G 0.05 (C) - >1 (-) 54 (-) >0.05
rs12755295 chr1:21048999 SH2D5 C - 13 A vs. G 0.067 (A) - >1 (-) 46 (-) >0.05
rs34814692 chr1:21141014 EIF4G3 C - 13 A vs. G 0.025 (A) - >1 (-) 53 (-) >0.05
rs35835983 chr1:21042033 KIF17 C - 13 T vs. C - - <1 (-) 36 (-) >0.05
rs12739780 chr1:21053006 SH2D5 C - 13 T vs. C 0.067 (T) - >1 (-) 48 (-) >0.05
rs115766888 chr1:21075488 HP1BP3 C - 5 T vs. C 0.033 (C) - <1 (-) 21 (-) >0.05
rs3767239 chr1:21163308 EIF4G3 C - 13 A vs. G 0.133 (G) 0.308 (G) >1 (-) 43 (-) >0.05
rs35386825 chr1:21032303 KIF17 C - 13 T vs. C 0.05 (T) - >1 (-) 41 (-) >0.05
rs900039 chr1:21030902 KIF17 C - 13 T vs. G 0.392 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs67962597 chr1:21032072 KIF17 C - 13 T vs. C 0.067 (T) - >1 (-) 41 (-) >0.05
rs35569152 chr1:21030815 KIF17 C - 13 T vs. C 0.067 (T) - >1 (-) 41 (-) >0.05
rs35872605 chr1:21030548 KIF17 C - 13 A vs. G 0.067 (A) - >1 (-) 40 (-) >0.05
rs76842954 chr1:21161344 EIF4G3 C - 12 T vs. C 0.033 (T) 0.125 (T) >1 (-) 18 (-) >0.05
rs12723997 chr1:21075147 HP1BP3 C - 13 T vs. G - - >1 (-) 49 (-) >0.05
rs111266876 chr1:21039004 KIF17 C - 13 A vs. G 0.4 (A) - <1 (-) 0 (-) >0.05
rs658851 chr1:21079425 HP1BP3 C - 12 T vs. C 0.417 (T) 0.125 (T) >1 (-) 5 (-) >0.05
rs35655089 chr1:21033345 KIF17 C - 13 A vs. G 0.067 (A) - >1 (-) 43 (-) >0.05
rs7552264 chr1:21087927 HP1BP3 C - 13 A vs. G 0.167 (A) 0.308 (G) <1 (-) 24 (-) >0.05
rs628497 chr1:21028613 KIF17 C - 13 T vs. C 0.433 (C) 0.275 (T) >1 (-) 1 (-) >0.05
rs749750 chr1:21030372 KIF17 C - 13 T vs. C - - <1 (-) 5 (-) >0.05
rs6702859 chr1:21031983 KIF17 C - 13 A vs. G 0.433 (A) 0.125 (G) >1 (-) 11 (-) >0.05
rs72970059 chr1:21035713 KIF17 C - 13 A vs. G 0.4 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs139177133 chr1:21140643 EIF4G3 C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs667071 chr1:21045726 SH2D5 [-499bp] C - 13 T vs. C 0.35 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs12407820 chr1:21032977 KIF17 C - 13 A vs. G - - >1 (-) 12 (-) >0.05
rs78741112 chr1:21041074 KIF17 C - 13 A vs. G 0.067 (A) 0.05 (A) >1 (-) 39 (-) >0.05
rs12725820 chr1:21120787 HP1BP3 [+6971bp] C - 13 A vs. G - - >1 (-) 51 (-) >0.05
rs116080492 chr1:21096594 HP1BP3 C - 6 C vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs116742440 chr1:21118267 HP1BP3 [+4451bp] C - 8 A vs. G 0.017 (A) - <1 (-) 47 (-) >0.05
rs875015 chr1:21033639 KIF17 C - 13 C vs. G 0.433 (G) 0.1 (C) <1 (-) 8 (-) >0.05
rs637990 chr1:21047616 SH2D5 C - 13 A vs. G 0.35 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs34909110 chr1:21041099 KIF17 C - 13 A vs. G - - >1 (-) 38 (-) >0.05
rs12726111 chr1:21120950 HP1BP3 [+7134bp] C - 13 A vs. G 0.067 (A) - >1 (-) 52 (-) >0.05
rs875016 chr1:21033779 KIF17 C - 13 A vs. G 0.433 (A) 0.117 (G) >1 (-) 12 (-) >0.05
rs77676789 chr1:21058046 SH2D5 C - 13 T vs. C 0.083 (T) 0.1 (T) >1 (-) 38 (-) >0.05
rs688182 chr1:21058107 SH2D5 C - 10 T vs. G 0.033 (T) - <1 (-) 0 (-) >0.05
rs2985313 chr1:21084999 HP1BP3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs111754764 chr1:21061193 SH2D5 [+1863bp] C - 10 C vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs79156934 chr1:21135415 EIF4G3 C - 13 A vs. G 0.092 (A) 0.308 (A) <1 (-) 44 (-) >0.05
rs28705082 chr1:21141855 EIF4G3 C - 8 A vs. C - - >1 (-) 33 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.