HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28772287 chr6:32674400 HLA-DQA2 [-34719bp] C - 12 T vs. C 0.183 (C) 0.325 (C) <1 (-) 8 (-) >0.05
rs9272109 chr6:32600253 HLA-DQA1 C - 5 T vs. G 0.333 (T) 0.383 (T) <1 (-) 12 (-) >0.05
rs9272153 chr6:32601018 HLA-DQA1 C - 5 T vs. C 0.3 (C) 0.292 (C) <1 (-) 11 (-) >0.05
rs9271526 chr6:32589862 HLA-DQA1 [-6094bp] C - 11 A vs. G 0.133 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs9271550 chr6:32590274 HLA-DQA1 [-5682bp] C - 11 A vs. T 0.133 (A) 0.217 (A) <1 (-) 0 (-) >0.05
rs2646995 chr6:32650492 HLA-DQB1 [+14332bp] C - 4 A vs. G 0.05 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs9368737 chr6:32658429 HLA-DQB1 [+22269bp] C - 9 T vs. C 0.258 (C) 0.492 (C) >1 (-) 54 (-) >0.05
rs9357152 chr6:32664960 HLA-DQB1 [+28800bp] C - 12 A vs. G 0.183 (G) 0.292 (G) >1 (-) 3 (-) >0.05
rs28383277 chr6:32586300 HLA-DQA1 [-9656bp] C - 3 T vs. C 0.025 (T) - <1 (-) 0 (-) >0.05
rs9272113 chr6:32600291 HLA-DQA1 C - 5 T vs. C - - >1 (-) 7 (-) >0.05
rs3997849 chr6:32682402 HLA-DQA2 [-26717bp] C - 11 T vs. C 0.25 (T) 0.175 (T) >1 (-) 18 (-) >0.05
rs9271508 chr6:32589410 HLA-DQA1 [-6546bp] C - 8 T vs. C 0.175 (T) 0.225 (T) >1 (-) 0 (-) >0.05
rs17212699 chr6:32675130 HLA-DQA2 [-33989bp] C - 12 A vs. G 0.167 (G) 0.292 (G) <1 (-) 7 (-) >0.05
rs3997848 chr6:32682394 HLA-DQA2 [-26725bp] C - 11 T vs. G 0.242 (G) 0.183 (G) <1 (-) 18 (-) >0.05
rs112643393 chr6:32662826 HLA-DQB1 [+26666bp] C - 7 T vs. C - - <1 (-) 28 (-) >0.05
rs1613056 chr6:32668946 HLA-DQB1 [+32786bp] C - 8 T vs. C 0.1 (T) 0.025 (T) >1 (-) 0 (-) >0.05
rs2858327 chr6:32658935 HLA-DQB1 [+22775bp] C - 10 A vs. G 0.075 (G) 0.2 (G) <1 (-) 5 (-) >0.05
rs28772281 chr6:32674086 HLA-DQA2 [-35033bp] C - 12 A vs. G 0.183 (A) 0.292 (A) >1 (-) 8 (-) >0.05
rs17212643 chr6:32674865 HLA-DQA2 [-34254bp] C - 12 A vs. T 0.183 (T) 0.283 (T) <1 (-) 8 (-) >0.05
rs9272064 chr6:32599338 HLA-DQA1 C - 4 T vs. C 0.392 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs9348891 chr6:32664971 HLA-DQB1 [+28811bp] C - 12 A vs. G 0.183 (G) 0.3 (G) >1 (-) 4 (-) >0.05
rs9272214 chr6:32602096 HLA-DQA1 C - 3 A vs. G 0.408 (A) 0.45 (A) <1 (-) 56 (-) >0.05
rs28383300 chr6:32586611 HLA-DQA1 [-9345bp] C - 3 T vs. C 0.083 (T) - <1 (-) 0 (-) >0.05
rs1794283 chr6:32666358 HLA-DQB1 [+30198bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs6934347 chr6:32673223 HLA-DQA2 [-35896bp] C - 12 C vs. G - - >1 (-) 5 (-) >0.05
rs28573770 chr6:32679275 HLA-DQA2 [-29844bp] C - 6 A vs. T - - <1 (-) 14 (-) >0.05
rs9271522 chr6:32589791 HLA-DQA1 [-6165bp] C - 10 T vs. C 0.2 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs28383301 chr6:32586631 HLA-DQA1 [-9325bp] C - 3 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs9272174 chr6:32601307 HLA-DQA1 C - 3 T vs. C 0.3 (T) 0.367 (T) <1 (-) 55 (-) >0.05
rs1794528 chr6:32672439 HLA-DQB1 [+36279bp] C - 8 T vs. C 0.1 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs9272108 chr6:32600228 HLA-DQA1 C - 5 T vs. C 0.342 (C) 0.375 (C) >1 (-) 14 (-) >0.05
rs6934185 chr6:32673233 HLA-DQA2 [-35886bp] C - 12 A vs. G - - >1 (-) 5 (-) >0.05
rs28891492 chr6:32662451 HLA-DQB1 [+26291bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs1794530 chr6:32671800 HLA-DQB1 [+35640bp] C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs6907114 chr6:32673361 HLA-DQA2 [-35758bp] C - 12 A vs. G 0.183 (A) 0.275 (A) <1 (-) 5 (-) >0.05
rs28383249 chr6:32585500 HLA-DQA1 [-10456bp] C - 4 T vs. C 0.108 (T) - <1 (-) 0 (-) >0.05
rs9272120 chr6:32600501 HLA-DQA1 C - 5 A vs. G 0.383 (G) 0.375 (G) <1 (-) 16 (-) >0.05
rs28383315 chr6:32587281 HLA-DQA1 [-8675bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs9272119 chr6:32600470 HLA-DQA1 C - 5 T vs. C 0.342 (C) 0.383 (C) <1 (-) 16 (-) >0.05
rs9272059 chr6:32599223 HLA-DQA1 C - 4 T vs. C 0.367 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs1794272 chr6:32672216 HLA-DQB1 [+36056bp] C - 8 A vs. T 0.1 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs9272130 chr6:32600638 HLA-DQA1 C - 5 A vs. G 0.375 (G) 0.35 (G) <1 (-) 16 (-) >0.05
rs1794511 chr6:32671207 HLA-DQB1 [+35047bp] C - 8 T vs. G 0.092 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs2858303 chr6:32650550 HLA-DQB1 [+14390bp] C - 4 T vs. C 0.075 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs9272103 chr6:32599896 HLA-DQA1 C - 5 T vs. C 0.392 (T) 0.392 (T) <1 (-) 13 (-) >0.05
rs9275576 chr6:32679326 HLA-DQA2 [-29793bp] C - 9 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs1794514 chr6:32667473 HLA-DQB1 [+31313bp] C - 7 C vs. G - - >1 (-) 0 (-) >0.05
rs9272117 chr6:32600411 HLA-DQA1 C - 5 T vs. C 0.383 (T) 0.392 (T) >1 (-) 16 (-) >0.05
rs9272061 chr6:32599250 HLA-DQA1 C - 4 A vs. G 0.375 (A) 0.375 (A) <1 (-) 0 (-) >0.05
rs9272134 chr6:32600705 HLA-DQA1 C - 5 C vs. G 0.383 (G) 0.35 (G) <1 (-) 17 (-) >0.05

Association studies for this region [+]