HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9273427 chr6:32627441 HLA-DQB1 C - 7 A vs. C - - >1 (-) 31 (-) >0.05
rs9273376 chr6:32626801 HLA-DQB1 [-443bp] C - 3 T vs. C - - <1 (-) 43 (-) >0.05
rs67838634 chr6:32662128 HLA-DQB1 [+25968bp] C - 12 A vs. G - - >1 (-) 20 (-) >0.05
rs9275177 chr6:32654174 HLA-DQB1 [+18014bp] C - 10 T vs. C 0.458 (T) 0.2 (C) <1 (-) 42 (-) >0.05
rs9275178 chr6:32654181 HLA-DQB1 [+18021bp] C - 10 A vs. G 0.467 (A) 0.2 (G) <1 (-) 42 (-) >0.05
rs9274677 chr6:32636639 HLA-DQB1 [+479bp] C - 4 T vs. C 0.242 (C) 0.433 (T) >1 (-) 0 (-) >0.05
rs9275366 chr6:32668171 HLA-DQB1 [+32011bp] C - 12 A vs. C 0.325 (C) 0.283 (C) >1 (-) 62 (-) >0.05
rs9275513 chr6:32674564 HLA-DQA2 [-34555bp] C - 12 A vs. T 0.467 (A) 0.442 (A) >1 (-) 22 (-) >0.05
rs9275368 chr6:32668183 HLA-DQB1 [+32023bp] C - 12 C vs. G 0.317 (G) 0.258 (G) >1 (-) 62 (-) >0.05
rs9275367 chr6:32668182 HLA-DQB1 [+32022bp] C - 12 A vs. G 0.325 (G) 0.267 (G) >1 (-) 62 (-) >0.05
rs9273479 chr6:32628093 HLA-DQB1 C - 7 T vs. C 0.442 (C) 0.292 (T) >1 (-) 39 (-) >0.05
rs3828798 chr6:32636038 HLA-DQB1 C - 4 A vs. T - - >1 (-) 0 (-) >0.05
rs3129731 chr6:32682207 HLA-DQA2 [-26912bp] C - 10 T vs. G 0.417 (T) 0.15 (T) >1 (-) 0 (-) >0.05
rs9275405 chr6:32669883 HLA-DQB1 [+33723bp] C - 12 A vs. G 0.333 (G) 0.3 (G) >1 (-) 58 (-) >0.05
rs9273374 chr6:32626614 HLA-DQB1 [-630bp] C - 3 A vs. G 0.475 (G) 0.467 (A) >1 (-) 41 (-) >0.05
rs9275276 chr6:32662676 HLA-DQB1 [+26516bp] C - 12 T vs. C 0.483 (C) 0.483 (C) >1 (-) 27 (-) >0.05
rs9275169 chr6:32653721 HLA-DQB1 [+17561bp] C - 10 A vs. T 0.45 (A) 0.208 (T) <1 (-) 41 (-) >0.05
rs9275170 chr6:32653726 HLA-DQB1 [+17566bp] C - 10 A vs. G 0.442 (A) 0.208 (G) <1 (-) 41 (-) >0.05
rs9275451 chr6:32671908 HLA-DQB1 [+35748bp] C - 4 T vs. G - - <1 (-) 56 (-) >0.05
rs9275295 chr6:32663391 HLA-DQB1 [+27231bp] C - 12 A vs. G 0.492 (G) 0.442 (A) >1 (-) 23 (-) >0.05
rs9275511 chr6:32674329 HLA-DQA2 [-34790bp] C - 12 A vs. G 0.492 (A) 0.442 (G) <1 (-) 23 (-) >0.05
rs9275286 chr6:32663143 HLA-DQB1 [+26983bp] C - 12 T vs. C - - >1 (-) 26 (-) >0.05
rs17533090 chr6:32590722 HLA-DQA1 [-5234bp] C - 8 T vs. G 0.192 (T) 0.142 (T) >1 (-) 49 (-) >0.05
rs9275329 chr6:32666831 HLA-DQB1 [+30671bp] C - 12 T vs. G 0.317 (T) 0.292 (T) <1 (-) 65 (-) >0.05
rs6457617 chr6:32663851 HLA-DQB1 [+27691bp] C - 12 T vs. C 0.492 (C) 0.45 (C) <1 (-) 20 (-) >0.05
rs2858305 chr6:32670464 HLA-DQB1 [+34304bp] C - 12 T vs. G 0.408 (G) 0.242 (G) <1 (-) 29 (-) >0.05
rs75483390 chr6:32585749 HLA-DQA1 [-10207bp] C - 3 A vs. G 0.008 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs9271365 chr6:32586794 HLA-DQA1 [-9162bp] C - 3 T vs. G 0.392 (G) 0.458 (G) >1 (-) 14 (-) >0.05
rs34629405 chr6:32590696 HLA-DQA1 [-5260bp] C - 8 T vs. C 0.192 (T) 0.142 (T) >1 (-) 49 (-) >0.05
rs3828794 chr6:32635903 HLA-DQB1 C - 4 A vs. G 0.233 (A) 0.4 (A) <1 (-) 0 (-) >0.05
rs9275172 chr6:32653997 HLA-DQB1 [+17837bp] C - 10 A vs. G 0.433 (G) 0.208 (A) >1 (-) 42 (-) >0.05
rs9273482 chr6:32628127 HLA-DQB1 C - 7 T vs. C 0.483 (T) 0.442 (T) >1 (-) 39 (-) >0.05
rs9275323 chr6:32666609 HLA-DQB1 [+30449bp] C - 12 T vs. C 0.325 (C) 0.275 (C) >1 (-) 65 (-) >0.05
rs9275475 chr6:32672556 HLA-DQB1 [+36396bp] C - 12 A vs. G 0.325 (G) 0.258 (G) >1 (-) 57 (-) >0.05
rs9275173 chr6:32654037 HLA-DQB1 [+17877bp] C - 10 A vs. T 0.467 (A) 0.2 (T) <1 (-) 42 (-) >0.05
rs9274654 chr6:32636280 HLA-DQB1 [+120bp] C - 4 T vs. G 0.183 (T) 0.383 (T) <1 (-) 0 (-) >0.05
rs9274655 chr6:32636289 HLA-DQB1 [+129bp] C - 4 T vs. C 0.183 (C) 0.383 (C) >1 (-) 0 (-) >0.05
rs2647051 chr6:32670897 HLA-DQB1 [+34737bp] C - 12 T vs. C 0.417 (T) 0.233 (T) >1 (-) 28 (-) >0.05
rs9275521 chr6:32674952 HLA-DQA2 [-34167bp] C - 12 T vs. C 0.408 (T) 0.233 (T) >1 (-) 27 (-) >0.05
rs9275263 chr6:32662344 HLA-DQB1 [+26184bp] C - 12 A vs. G - - >1 (-) 34 (-) >0.05
rs9275260 chr6:32661575 HLA-DQB1 [+25415bp] C - 12 T vs. C 0.492 (T) 0.442 (C) <1 (-) 21 (-) >0.05
rs9275471 chr6:32672491 HLA-DQB1 [+36331bp] C - 12 A vs. G 0.325 (A) 0.217 (A) <1 (-) 57 (-) >0.05
rs9275472 chr6:32672494 HLA-DQB1 [+36334bp] C - 12 A vs. G 0.325 (A) 0.217 (A) <1 (-) 57 (-) >0.05
rs9275284 chr6:32663073 HLA-DQB1 [+26913bp] C - 12 T vs. C 0.492 (T) 0.408 (C) <1 (-) 25 (-) >0.05
rs36233208 chr6:32577606 HLA-DQA1 [-18350bp] C - 5 T vs. G 0.142 (T) - <1 (-) 3 (-) >0.05
rs9274619 chr6:32635954 HLA-DQB1 C - 4 A vs. G 0.175 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs9275481 chr6:32672913 HLA-DQA2 [-36206bp] C - 12 A vs. T 0.325 (A) 0.258 (A) <1 (-) 60 (-) >0.05
rs9271219 chr6:32579354 HLA-DQA1 [-16602bp] C - 5 T vs. C 0.442 (C) - <1 (-) 47 (-) >0.05
rs201449386 chr6:32662239 HLA-DQB1 [+26079bp] C - 12 T vs. C - - >1 (-) 21 (-) >0.05
rs9271220 chr6:32579355 HLA-DQA1 [-16601bp] C - 5 A vs. G 0.442 (A) - >1 (-) 47 (-) >0.05

Association studies for this region [+]