GLIS1, chr1:53971910-54199877 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1181191 chr1:54224270 NDC1 [-6863bp] All: C 103,235 14 C vs. A - - 0.85 (0.78-0.91) 0 (0-17) 2.27e-05
Meta_image?name=rs1181191

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1181191 chr1:54224270 NDC1 [-6863bp] All: C 103,235 14 C vs. A - - 0.85 (0.78-0.91) 0 (0-17) 2.27e-05
rs17536223 chr1:54234580 NDC1 All: C 108,990 15 A vs. C 0.075 (A) 0.058 (A) 1.11 (1.05-1.17) 0 (0-4) 9.98e-05
rs72660702 chr1:54230086 NDC1 [-1047bp] All: C 108,990 15 A vs. G 0.075 (A) 0.033 (A) 1.12 (1.06-1.19) 0 (0-4) 1.01e-04
rs4927036 chr1:54248518 NDC1 All: C 108,990 15 G vs. A 0.075 (G) 0.058 (G) 1.10 (1.05-1.15) 0 (0-2) 1.12e-04
rs6657928 chr1:54249029 NDC1 C - 13 T vs. C 0.133 (C) 0.058 (C) <1 (-) 0 (-) <0.05
rs1181196 chr1:54240170 NDC1 C - 13 T vs. C 0.133 (C) 0.067 (C) <1 (-) 0 (-) <0.05
rs12562523 chr1:54249533 NDC1 C - 13 T vs. C 0.075 (T) 0.058 (T) >1 (-) 0 (-) <0.05
rs12568415 chr1:54227790 NDC1 [-3343bp] C - 13 C vs. G 0.075 (G) 0.058 (G) <1 (-) 0 (-) <0.05
rs72662312 chr1:54243532 NDC1 C - 13 A vs. G 0.075 (A) 0.05 (A) >1 (-) 0 (-) <0.05
rs1181199 chr1:54235082 NDC1 C - 13 T vs. C 0.133 (C) 0.067 (C) <1 (-) 3 (-) <0.05
rs72662306 chr1:54240238 NDC1 C - 13 A vs. T 0.067 (T) 0.058 (T) <1 (-) 0 (-) <0.05
rs3753420 chr1:54234215 NDC1 C - 13 T vs. C 0.125 (C) 0.067 (C) <1 (-) 4 (-) <0.05
rs72662307 chr1:54240489 NDC1 C - 13 A vs. C 0.075 (C) 0.067 (C) <1 (-) 0 (-) <0.05
rs72662309 chr1:54240555 NDC1 C - 13 A vs. C 0.133 (C) 0.058 (C) <1 (-) 0 (-) <0.05
rs11206185 chr1:54108212 GLIS1 C - 13 C vs. G 0.158 (G) 0.075 (G) <1 (-) 0 (-) <0.05
rs56360139 chr1:54107269 GLIS1 C - 13 A vs. C 0.15 (A) 0.075 (A) >1 (-) 0 (-) <0.05
rs61775445 chr1:54104301 GLIS1 C - 13 A vs. G 0.158 (A) 0.075 (A) >1 (-) 0 (-) <0.05
rs17382968 chr1:54104906 GLIS1 C - 13 T vs. C 0.158 (C) 0.075 (C) <1 (-) 0 (-) <0.05
rs17382914 chr1:54102943 GLIS1 C - 13 T vs. C 0.158 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs79041677 chr1:54020311 GLIS1 C - 10 A vs. C - - <1 (-) 0 (-) <0.05
rs2986656 chr1:54011124 GLIS1 C - 13 T vs. C 0.283 (T) 0.458 (C) <1 (-) 2 (-) <0.05
rs2986655 chr1:54011192 GLIS1 C - 13 A vs. G 0.283 (A) 0.467 (G) <1 (-) 3 (-) <0.05
rs11588637 chr1:54120689 GLIS1 C - 13 C vs. G 0.167 (C) 0.075 (C) >1 (-) 0 (-) <0.05
rs2316194 chr1:54013465 GLIS1 C - 13 T vs. C 0.3 (C) 0.408 (T) >1 (-) 3 (-) <0.05
rs2316193 chr1:54013462 GLIS1 C - 13 C vs. G 0.283 (G) 0.425 (C) >1 (-) 3 (-) <0.05
rs7523635 chr1:54011869 GLIS1 C - 13 A vs. G 0.292 (G) 0.433 (A) >1 (-) 3 (-) <0.05
rs6693508 chr1:54013042 GLIS1 C - 13 T vs. G 0.283 (T) 0.467 (G) <1 (-) 4 (-) <0.05
rs540126 chr1:54011903 GLIS1 C - 13 A vs. G 0.292 (A) 0.467 (G) <1 (-) 3 (-) <0.05
rs11206170 chr1:54010926 GLIS1 C - 13 A vs. G 0.283 (G) 0.467 (A) >1 (-) 4 (-) <0.05
rs12752674 chr1:54007612 GLIS1 C - 13 T vs. C 0.283 (T) 0.467 (C) <1 (-) 6 (-) <0.05
rs141189676 chr1:54008071 GLIS1 C - 8 T vs. C - - <1 (-) 0 (-) <0.05
rs61776602 chr1:54116576 GLIS1 C - 13 T vs. C 0.158 (C) 0.075 (C) <1 (-) 0 (-) <0.05
rs7522391 chr1:54118849 GLIS1 C - 13 A vs. G 0.158 (A) 0.075 (A) >1 (-) 0 (-) <0.05
rs7548123 chr1:54119284 GLIS1 C - 13 C vs. G 0.158 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs4626818 chr1:54118490 GLIS1 C - 13 T vs. G 0.15 (T) 0.083 (T) >1 (-) 0 (-) <0.05
rs76101645 chr1:54117388 GLIS1 C - 13 A vs. G - - <1 (-) 0 (-) <0.05
rs11576071 chr1:54118424 GLIS1 C - 13 A vs. G 0.158 (G) 0.075 (G) <1 (-) 0 (-) <0.05
rs56198574 chr1:54115984 GLIS1 C - 13 T vs. C 0.158 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs11589559 chr1:54112990 GLIS1 C - 13 T vs. C 0.158 (C) 0.067 (C) <1 (-) 0 (-) <0.05
rs11590616 chr1:54120838 GLIS1 C - 13 T vs. C 0.158 (C) 0.075 (C) <1 (-) 0 (-) <0.05
rs11591157 chr1:54124935 GLIS1 C - 13 A vs. G 0.125 (A) 0.1 (A) >1 (-) 0 (-) <0.05
rs17387378 chr1:54121391 GLIS1 C - 13 T vs. C 0.158 (C) 0.075 (C) <1 (-) 0 (-) <0.05
rs17383010 chr1:54106668 GLIS1 C - 13 C vs. G 0.158 (C) 0.075 (C) >1 (-) 0 (-) <0.05
rs17387213 chr1:54109522 GLIS1 C - 13 T vs. C 0.158 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs17387150 chr1:54106705 GLIS1 C - 13 T vs. G 0.158 (G) 0.075 (G) <1 (-) 0 (-) <0.05
rs11577232 chr1:54120733 GLIS1 C - 13 A vs. G 0.15 (G) 0.067 (G) <1 (-) 0 (-) <0.05
rs55932050 chr1:54103346 GLIS1 C - 13 A vs. G 0.158 (A) 0.075 (A) >1 (-) 0 (-) <0.05
rs3013777 chr1:54152621 GLIS1 C - 13 T vs. C 0.367 (T) 0.5 (T) >1 (-) 0 (-) <0.05
rs2948044 chr1:54149577 GLIS1 C - 13 C vs. G 0.367 (G) 0.5 (G) <1 (-) 0 (-) <0.05
rs11206194 chr1:54163071 GLIS1 C - 13 A vs. G 0.367 (G) 0.45 (G) <1 (-) 0 (-) <0.05

Association studies for this region [+]