Study: Nalls, 2014

Population Ethnicity Diagnosis Source # Cases (% women) # Controls (% women) AAO (sd) AAO range AAE (sd) AAE range Ctrl age (sd) Ctrl age range # Polymorphisms
Iceland (CHARGE-AGES-RS) C ICD codes, medication PO 146 (55%) 5609 (59%) 75 (8) - - - 69 (9) - 8,205

Polymorphisms in this population [-]

Polymorphism Location (hg19) Gene Allele contrast Ethnicity # Studies # Samples 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9956954 chr18:50302147 DCC T vs. C All: C 15 108,990 0.108 (T) - 1.11 (1.06-1.17) 0 (0-49) 6.88e-05
rs9946240 chr18:50302221 DCC C vs. T All: C 15 108,990 0.108 (C) 0.033 (C) 1.11 (1.05-1.17) 0 (0-51) 7.47e-05
rs9957066 chr18:50302280 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 0 (0-51) 7.42e-05
rs28720976 chr18:50302448 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 0 (0-51) 7.76e-05
rs28710315 chr18:50302476 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 0 (0-50) 8.23e-05
rs9947544 chr18:50334201 DCC A vs. G All: C 15 108,990 0.108 (A) - 1.11 (1.05-1.17) 13 (0-51) 1.00e-04
rs112373415 chr18:50335927 DCC T vs. C All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 14 (0-52) 9.62e-05
rs4330004 chr18:50337632 DCC A vs. G All: C 15 108,990 0.108 (A) - 1.11 (1.05-1.17) 13 (0-51) 9.15e-05
rs1431735 chr18:50337688 DCC A vs. G All: C 15 108,990 0.108 (A) 0.017 (A) 1.11 (1.05-1.17) 14 (0-52) 8.80e-05
rs9964103 chr18:50339432 DCC T vs. G All: C 15 108,990 0.108 (T) 0.033 (T) 1.11 (1.05-1.17) 13 (0-51) 1.14e-04
rs11082949 chr18:50340987 DCC G vs. A All: C 15 108,990 0.1 (G) 0.167 (G) 1.11 (1.05-1.16) 12 (0-50) 1.35e-04
rs112315835 chr18:50344725 DCC T vs. C All: C 15 108,990 0.108 (T) 0.167 (T) 1.11 (1.05-1.17) 12 (0-50) 1.26e-04
rs16955568 chr18:50345028 DCC A vs. C All: C 15 108,990 0.108 (A) 0.167 (A) 1.11 (1.05-1.17) 11 (0-49) 9.72e-05
rs9304433 chr18:50345783 DCC T vs. G All: C 15 108,990 0.108 (T) 0.167 (T) 1.12 (1.06-1.19) 22 (0-58) 7.94e-05
rs62091919 chr18:67950442 SOCS6 [-5695bp] G vs. T All: C 15 108,990 0.167 (G) 0.117 (G) 1.09 (1.04-1.14) 0 (0-38) 7.23e-05
rs7242186 chr18:67981861 SOCS6 G vs. A All: C 15 108,990 0.225 (G) 0.092 (G) 1.07 (1.04-1.11) 0 (0-28) 1.31e-04
rs7244655 chr18:67986087 SOCS6 G vs. A All: C 15 108,990 - - 0.93 (0.89-0.96) 0 (0-43) 4.76e-05
rs72967810 chr18:72031638 C18orf63 [+5216bp] C vs. A All: C 15 108,990 0.192 (C) 0.025 (C) 1.11 (1.06-1.17) 2 (0-55) 7.83e-05
rs75277584 chr18:72031845 C18orf63 [+5423bp] C vs. T All: C 15 108,990 - - 0.90 (0.85-0.95) 0 (0-53) 5.90e-05
rs139883368 chr18:72031982 C18orf63 [+5560bp] A vs. C All: C 15 108,990 - - 0.90 (0.85-0.95) 0 (0-53) 5.93e-05
rs72967819 chr18:72033573 C18orf63 [+7151bp] A vs. G All: C 15 108,990 0.167 (A) 0.05 (A) 1.11 (1.05-1.16) 0 (0-53) 5.52e-05
rs2096948 chr18:72041185 C18orf63 [+14763bp] C vs. T All: C 15 108,990 0.117 (C) 0.033 (C) 1.10 (1.05-1.16) 9 (0-46) 1.42e-04
rs12458543 chr18:72042407 C18orf63 [+15985bp] C vs. T All: C 15 108,990 0.1 (C) 0.033 (C) 1.12 (1.06-1.19) 0 (0-53) 8.95e-05
rs113465793 chr19:18556417 ELL C vs. A All: C 15 108,990 0.183 (C) 0.042 (C) 0.91 (0.87-0.95) 0 (0-38) 7.76e-05
rs2303693 chr19:18557673 ELL T vs. C All: C 15 108,990 0.167 (T) 0.058 (T) 0.91 (0.86-0.95) 0 (0-31) 7.09e-05
rs2303694 chr19:18562438 ELL T vs. C All: C 15 108,990 0.183 (T) 0.058 (T) 0.91 (0.87-0.95) 0 (0-32) 1.08e-04
rs79888481 chr19:18569957 ELL A vs. G All: C 15 108,990 0.183 (A) 0.058 (A) 0.91 (0.87-0.96) 0 (0-31) 1.20e-04
rs4802124 chr19:42104609 CEACAM21 [+11412bp] A vs. G All: C 15 108,990 - - 0.93 (0.89-0.96) 32 (0-63) 8.91e-05
rs3848566 chr19:42105482 CEACAM21 [+12285bp] C vs. T All: C 15 108,990 0.233 (C) 0.433 (C) 1.08 (1.04-1.12) 27 (0-61) 2.12e-04
rs1029804 chr19:42107207 CEACAM21 [+14010bp] G vs. T All: C 14 107,386 0.233 (G) 0.425 (G) 1.09 (1.05-1.13) 17 (0-55) 2.39e-05
rs16988130 chr20:2824849 VPS16 G vs. A All: C 15 108,990 0.275 (G) 0.367 (G) 0.93 (0.90-0.97) 0 (0-35) 2.71e-04
rs7268763 chr20:2828596 VPS16 G vs. A All: C 15 108,990 0.292 (G) 0.467 (G) 0.93 (0.90-0.96) 0 (0-37) 9.32e-05
rs6132979 chr20:2833939 VPS16 A vs. G All: C 15 108,990 0.275 (A) 0.342 (A) 0.94 (0.90-0.97) 0 (0-32) 5.15e-04
rs1324392 chr20:2857854 PTPRA G vs. A All: C 15 108,990 0.267 (G) 0.342 (G) 0.94 (0.91-0.98) 0 (0-25) 0.001
rs6138937 chr20:2882931 PTPRA C vs. T All: C 15 108,990 0.275 (C) 0.35 (C) 0.94 (0.91-0.98) 0 (0-18) 0.001
rs6138952 chr20:2901540 PTPRA G vs. A All: C 15 108,990 0.267 (G) 0.342 (G) 0.94 (0.91-0.98) 0 (0-16) 0.001
rs58241213 chr20:3148720 UBOX5 [+7878bp] G vs. A All: C 15 108,990 0.5 (G) 0.342 (G) 1.10 (1.06-1.15) 44 (0-70) 9.89e-07
rs35420316 chr20:3151345 UBOX5 [+10503bp] G vs. A All: C 15 108,990 - - 1.10 (1.06-1.14) 42 (0-69) 5.72e-07
rs55785911 chr20:3153503 UBOX5 [+12661bp] A vs. G All: C 21 120,238 0.417 (A) 0.392 (G) 0.91 (0.88-0.94) 29 (0-58) 3.30e-10
rs55800553 chr20:3154525 UBOX5 [+13683bp] T vs. C All: C 15 108,990 0.425 (T) 0.417 (C) 0.90 (0.86-0.94) 53 (15-74) 3.47e-07
rs4813629 chr20:3155375 UBOX5 [+14533bp] A vs. G All: C 15 108,990 0.45 (A) 0.283 (G) 0.92 (0.89-0.96) 39 (0-67) 6.96e-06
rs67820322 chr20:3161010 DDRGK1 [-9986bp] T vs. C All: C 15 108,990 0.467 (T) 0.283 (C) 0.91 (0.88-0.94) 37 (0-66) 5.33e-08
rs8123287 chr20:3163565 DDRGK1 [-7431bp] C vs. T All: C 15 108,990 - - 0.93 (0.91-0.97) 23 (0-58) 4.01e-05
rs7270155 chr20:3163883 DDRGK1 [-7113bp] C vs. A All: C 15 108,990 - - 0.94 (0.91-0.97) 24 (0-59) 4.39e-05
rs2295545 chr20:3164686 DDRGK1 [-6310bp] C vs. T All: C 15 108,990 0.458 (C) 0.283 (T) 0.91 (0.89-0.94) 39 (0-67) 4.76e-08
rs8119139 chr20:3165887 DDRGK1 [-5109bp] G vs. C All: C 15 108,990 0.442 (G) 0.317 (C) 0.91 (0.87-0.94) 39 (0-67) 2.93e-08
rs8125675 chr20:3165888 DDRGK1 [-5108bp] G vs. A All: C 15 108,990 0.458 (G) 0.317 (A) 0.91 (0.87-0.94) 39 (0-67) 2.95e-08
rs4815573 chr20:3166671 DDRGK1 [-4325bp] C vs. T All: C 15 108,990 - - 1.09 (1.06-1.13) 38 (0-66) 5.53e-08
rs8116557 chr20:3167700 DDRGK1 [-3296bp] A vs. G All: C 15 108,990 - - 1.09 (1.06-1.13) 38 (0-66) 5.43e-08
rs8122372 chr20:3167857 DDRGK1 [-3139bp] G vs. A All: C 15 108,990 - - 1.09 (1.06-1.13) 38 (0-66) 5.88e-08