SPPL2C, chr17:43922256-43924438 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17769552 chr17:43927290 SPPL2C [+2852bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs242929 chr17:43940229 SPPL2C [+15791bp] C - 12 A vs. G 0.333 (G) 0.158 (A) <1 (-) 34 (-) <5.00e-08
rs11657882 chr17:43945416 SPPL2C [+20978bp] C - 12 A vs. G 0.333 (A) 0.217 (G) >1 (-) 36 (-) <5.00e-08
rs183086 chr17:43945745 SPPL2C [+21307bp] C - 12 A vs. G - - <1 (-) 36 (-) <5.00e-08
rs7218286 chr17:43945524 SPPL2C [+21086bp] C - 12 A vs. G 0.333 (A) 0.217 (G) >1 (-) 35 (-) <5.00e-08
rs8064870 chr17:43926789 SPPL2C [+2351bp] All: C 103,235 14 C vs. T 0.483 (C) 0.208 (C) 0.91 (0.88-0.94) 14 (0-53) 5.47e-09
rs242941 chr17:43892520 CRHR1 All: C 103,235 14 A vs. C 0.292 (A) 0.125 (A) 1.11 (1.07-1.14) 0 (0-35) 6.19e-09
rs2521811 chr17:43934044 SPPL2C [+9606bp] C - 12 T vs. C 0.333 (T) 0.225 (C) >1 (-) 46 (-) <5.00e-08
rs8068916 chr17:43926987 SPPL2C [+2549bp] All: C 103,235 14 G vs. T 0.475 (G) 0.208 (G) 0.91 (0.88-0.94) 14 (0-52) 6.92e-09
rs242948 chr17:43913544 CRHR1 [+350bp] C - 12 T vs. G 0.358 (G) 0.208 (G) >1 (-) 17 (-) <5.00e-08
rs3744457 chr17:43972915 MAPT C - 12 T vs. C 0.3 (C) 0.292 (T) <1 (-) 35 (-) <5.00e-08
rs242933 chr17:43938470 SPPL2C [+14032bp] C - 12 A vs. G 0.325 (A) 0.358 (G) >1 (-) 44 (-) <5.00e-08
rs242923 chr17:43945981 SPPL2C [+21543bp] C - 12 A vs. G 0.325 (A) 0.358 (G) >1 (-) 43 (-) <5.00e-08
rs3935637 chr17:43928573 SPPL2C [+4135bp] C - 12 T vs. C 0.475 (C) 0.192 (C) >1 (-) 17 (-) <1.00e-06
rs4616318 chr17:43928810 SPPL2C [+4372bp] C - 12 A vs. G 0.475 (G) 0.192 (G) >1 (-) 17 (-) <1.00e-06
rs242940 chr17:43892600 CRHR1 All: C 103,235 14 A vs. G 0.492 (A) 0.125 (A) 0.92 (0.90-0.95) 8 (0-46) 1.03e-06
rs171440 chr17:43893487 CRHR1 All: C 103,235 14 A vs. G 0.492 (A) 0.142 (G) 1.08 (1.05-1.12) 9 (0-46) 1.20e-06
rs242925 chr17:43888866 CRHR1 All: C 103,235 14 T vs. C 0.5 (T) 0.108 (C) 1.08 (1.05-1.12) 11 (0-49) 1.59e-06
rs242949 chr17:43911716 CRHR1 All: C 103,235 14 T vs. G 0.458 (T) 0.208 (G) 1.08 (1.05-1.12) 13 (0-52) 3.20e-06
rs110402 chr17:43880047 CRHR1 All: C 103,235 14 A vs. G 0.483 (A) 0.133 (G) 1.08 (1.04-1.11) 18 (0-56) 4.52e-06
rs81189 chr17:43894798 CRHR1 C - 12 C vs. G 0.5 (C) 0.142 (G) >1 (-) 8 (-) <1.00e-04
rs242924 chr17:43885367 CRHR1 All: C 103,235 14 T vs. G 0.483 (T) 0.125 (G) 1.08 (1.04-1.11) 17 (0-55) 6.33e-06
rs62057097 chr17:43873284 CRHR1 All: C 103,235 14 T vs. C 0.133 (T) - 1.11 (1.06-1.16) 0 (0-23) 2.85e-05
rs11867635 chr17:43892021 CRHR1 All: C 103,235 14 A vs. G 0.142 (A) - 1.10 (1.05-1.16) 0 (0-25) 3.06e-05
rs2316770 chr17:43934256 SPPL2C [+9818bp] All: C 103,235 14 A vs. G 0.442 (A) 0.175 (A) 1.08 (1.04-1.11) 0 (0-49) 3.71e-05
rs17763104 chr17:43905795 CRHR1 All: C 103,235 14 A vs. G 0.15 (A) - 1.10 (1.05-1.15) 0 (0-21) 6.69e-05
rs242928 chr17:43943051 SPPL2C [+18613bp] All: C 103,235 14 A vs. G 0.45 (A) 0.208 (A) 1.07 (1.03-1.10) 0 (0-50) 9.52e-05
rs11869096 chr17:43945100 SPPL2C [+20662bp] All: C 103,235 14 A vs. G 0.45 (A) 0.217 (A) 1.07 (1.03-1.10) 0 (0-51) 1.12e-04
rs17690883 chr17:43928866 SPPL2C [+4428bp] All: C 103,235 14 T vs. C 0.142 (T) 0.042 (T) 1.10 (1.05-1.15) 0 (0-46) 1.33e-04
rs8079387 chr17:43926777 SPPL2C [+2339bp] C - 12 A vs. T 0.258 (T) 0.208 (T) <1 (-) 5 (-) <0.05
rs118174035 chr17:43916189 CRHR1 [+2995bp] C - 9 A vs. G 0.042 (A) - >1 (-) 45 (-) <0.05
rs242943 chr17:43924412 SPPL2C C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) <0.05
rs111358211 chr17:43932122 SPPL2C [+7684bp] C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) <0.05
rs67896329 chr17:43945088 SPPL2C [+20650bp] C - 11 T vs. C 0.008 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs12937956 chr17:43916930 CRHR1 [+3736bp] C - 12 T vs. G - - >1 (-) 11 (-) <0.05
rs5820597 chr17:43916148 CRHR1 [+2954bp] C - 12 C vs. G - - >1 (-) 11 (-) <0.05
rs28364027 chr17:43912805 CRHR1 C - 12 A vs. G 0.033 (G) - <1 (-) 11 (-) <0.05
rs16940686 chr17:43913030 CRHR1 C - 12 T vs. G 0.033 (T) - >1 (-) 11 (-) <0.05
rs242934 chr17:43936664 SPPL2C [+12226bp] C - 12 C vs. G 0.45 (C) 0.217 (C) >1 (-) 0 (-) <0.05
rs114469358 chr17:43962562 MAPT [-9186bp] C - 12 T vs. C 0.075 (C) - <1 (-) 0 (-) <0.05
rs117801051 chr17:43962575 MAPT [-9173bp] C - 12 T vs. C 0.075 (T) - >1 (-) 0 (-) <0.05
rs7220421 chr17:43945726 SPPL2C [+21288bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs2019820 chr17:43959825 MAPT [-11923bp] C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs117732767 chr17:43930715 SPPL2C [+6277bp] C - 12 A vs. C 0.033 (A) - >1 (-) 27 (-) <0.05
rs71375321 chr17:43902915 CRHR1 C - 12 A vs. G 0.033 (A) - >1 (-) 12 (-) <0.05
rs16940711 chr17:43930006 SPPL2C [+5568bp] C - 12 A vs. C 0.033 (C) - <1 (-) 26 (-) <0.05
rs34845889 chr17:43928906 SPPL2C [+4468bp] C - 12 C vs. G 0.025 (C) 0.033 (C) >1 (-) 28 (-) <0.05
rs9910173 chr17:43969897 MAPT [-1851bp] C - 12 A vs. C - - <1 (-) 0 (-) <0.05
rs36048893 chr17:43901763 CRHR1 C - 12 T vs. C 0.033 (T) - >1 (-) 13 (-) <0.05
rs117350367 chr17:43929952 SPPL2C [+5514bp] C - 12 A vs. G 0.033 (A) - >1 (-) 30 (-) <0.05
rs242926 chr17:43966105 MAPT [-5643bp] C - 11 C vs. G 0.1 (C) - >1 (-) 11 (-) <0.05

Association studies for this region [+]