SLC41A1, chr1:205758221-205782876 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs823118 chr1:205723572 NUCKS1 [+4168bp] All: C 120,238 21 C vs. T 0.45 (C) 0.417 (T) 0.89 (0.87-0.92) 41 (0-65) 1.96e-16
Meta_image?name=rs823118

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7536285 chr1:205757569 SLC41A1 [-652bp] All: C 108,990 15 T vs. C - - 1.09 (1.05-1.14) 35 (0-65) 2.89e-06
rs708729 chr1:205773461 SLC41A1 All: C 108,990 15 C vs. T 0.15 (C) 0.258 (C) 0.91 (0.87-0.94) 47 (3-71) 3.00e-06
rs1775146 chr1:205756168 SLC41A1 [-2053bp] All: C 108,990 15 A vs. G 0.2 (A) 0.392 (G) 0.92 (0.88-0.95) 33 (0-64) 3.57e-06
rs823131 chr1:205714437 NUCKS1 All: C 103,470 14 A vs. G 0.033 (A) 0.158 (A) 0.78 (0.70-0.87) 0 (0-54) 3.62e-06
rs823133 chr1:205737781 RAB7L1 All: C 108,990 15 C vs. T - - 1.24 (1.13-1.37) 0 (0-53) 4.22e-06
rs823069 chr1:205771801 SLC41A1 All: C 108,990 15 A vs. G - - 1.10 (1.06-1.15) 44 (0-70) 4.53e-06
rs823150 chr1:205735486 RAB7L1 [-1628bp] All: C 108,990 15 C vs. T 0.008 (C) 0.158 (C) 0.80 (0.72-0.88) 0 (0-53) 4.87e-06
rs860311 chr1:205723619 NUCKS1 [+4215bp] All: C 108,990 15 A vs. C 0.017 (A) 0.175 (A) 0.84 (0.77-0.90) 24 (0-59) 5.01e-06
rs823072 chr1:205773652 SLC41A1 All: C 108,990 15 C vs. T 0.167 (C) 0.258 (C) 0.91 (0.88-0.95) 46 (1-70) 7.44e-06
rs823156 chr1:205764640 SLC41A1 All: C 108,990 15 G vs. A 0.142 (G) 0.258 (G) 0.91 (0.87-0.95) 29 (0-62) 8.37e-06
rs708730 chr1:205777780 SLC41A1 All: C 108,990 15 G vs. A 0.117 (G) 0.258 (G) 0.91 (0.87-0.95) 55 (20-75) 9.00e-06
rs823135 chr1:205738166 RAB7L1 All: C 108,990 15 T vs. C 0.008 (T) 0.167 (T) 0.80 (0.73-0.88) 0 (0-52) 9.39e-06
rs12565321 chr1:205755144 SLC41A1 [-3077bp] All: C 108,990 15 C vs. T - - 1.09 (1.05-1.13) 41 (0-68) 9.57e-06
rs823140 chr1:205740403 RAB7L1 All: C 108,990 15 G vs. A - - 1.19 (1.10-1.29) 29 (0-62) 9.78e-06
rs823071 chr1:205773379 SLC41A1 All: C 108,990 15 G vs. T 0.05 (G) 0.258 (G) 0.86 (0.80-0.92) 0 (0-35) 9.96e-06
rs1341249 chr1:205759876 SLC41A1 All: C 108,990 15 T vs. C 0.167 (T) 0.392 (C) 0.91 (0.87-0.95) 3 (0-55) 1.01e-05
rs823065 chr1:205771061 SLC41A1 All: C 108,990 15 T vs. G 0.05 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-38) 1.03e-05
rs823066 chr1:205771173 SLC41A1 All: C 108,990 15 A vs. G 0.05 (A) 0.258 (A) 0.86 (0.80-0.92) 0 (0-39) 1.16e-05
rs12567894 chr1:205755151 SLC41A1 [-3070bp] All: C 108,990 15 T vs. C - - 1.09 (1.05-1.13) 42 (0-68) 1.22e-05
rs823070 chr1:205772370 SLC41A1 All: C 108,990 15 T vs. C 0.05 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-40) 1.24e-05
rs823073 chr1:205774156 SLC41A1 All: C 108,990 15 T vs. C 0.042 (T) 0.258 (T) 0.85 (0.79-0.92) 0 (0-43) 1.31e-05
rs823139 chr1:205739396 RAB7L1 All: C 108,990 15 T vs. G 0.125 (T) 0.158 (T) 0.90 (0.85-0.94) 36 (0-66) 1.38e-05
rs823077 chr1:205776109 SLC41A1 All: C 108,990 15 T vs. C 0.05 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-40) 1.42e-05
rs823078 chr1:205776458 SLC41A1 All: C 108,990 15 T vs. C 0.058 (T) 0.258 (T) 0.86 (0.80-0.92) 0 (0-40) 1.42e-05
rs823079 chr1:205777159 SLC41A1 All: C 108,990 15 C vs. T - - 1.17 (1.09-1.25) 0 (0-40) 1.42e-05
rs11240572 chr1:205808013 PM20D1 All: C 108,990 15 C vs. A - 0.208 (A) 1.22 (1.12-1.34) 11 (0-49) 1.75e-05
rs823068 chr1:205771720 SLC41A1 All: C 108,990 15 C vs. T - - 1.16 (1.09-1.25) 0 (0-36) 1.81e-05
rs823067 chr1:205771704 SLC41A1 All: C 108,990 15 C vs. T - - 1.16 (1.08-1.24) 0 (0-44) 2.81e-05
rs11240559 chr1:205709621 NUCKS1 All: C 108,990 15 G vs. T 0.292 (G) 0.442 (G) 0.93 (0.89-0.96) 29 (0-62) 2.89e-05
rs823129 chr1:205713799 NUCKS1 All: C 108,990 15 T vs. C 0.033 (T) 0.183 (T) 0.83 (0.75-0.90) 15 (0-53) 3.18e-05
rs12046305 chr1:205714478 NUCKS1 All: C 108,990 15 A vs. G 0.292 (A) 0.442 (A) 0.93 (0.89-0.96) 29 (0-62) 3.22e-05
rs1832775 chr1:205734032 RAB7L1 [-3082bp] All: C 108,990 15 T vs. C 0.292 (T) 0.442 (T) 0.93 (0.89-0.96) 36 (0-66) 3.23e-05
rs11240561 chr1:205712957 NUCKS1 All: C 108,990 15 G vs. T 0.292 (G) 0.442 (G) 0.93 (0.89-0.96) 29 (0-62) 3.30e-05
rs56276813 chr1:205730573 RAB7L1 [-6541bp] All: C 108,990 15 T vs. G 0.3 (T) 0.425 (T) 0.93 (0.89-0.96) 37 (0-66) 3.36e-05
rs71633563 chr1:205735854 RAB7L1 [-1260bp] C - 13 T vs. C 0.033 (T) 0.392 (T) >1 (-) 47 (-) <1.00e-04
rs12047038 chr1:205718468 NUCKS1 All: C 108,990 15 G vs. A 0.275 (G) 0.467 (G) 0.93 (0.89-0.96) 30 (0-62) 3.50e-05
rs823085 chr1:205798033 PM20D1 All: C 108,990 15 G vs. A 0.058 (G) 0.258 (G) 0.87 (0.81-0.93) 0 (0-38) 6.10e-05
rs823076 chr1:205775810 SLC41A1 All: C 108,990 15 T vs. C 0.05 (T) 0.267 (T) 0.85 (0.79-0.92) 0 (0-21) 6.98e-05
rs844004 chr1:205792680 PM20D1 [-4470bp] All: C 108,990 15 T vs. C 0.05 (T) 0.258 (T) 0.87 (0.81-0.93) 0 (0-45) 8.80e-05
rs1626710 chr1:205727466 NUCKS1 [+8062bp] All: C 108,990 15 C vs. A 0.008 (C) 0.158 (C) 0.85 (0.78-0.93) 2 (0-54) 2.20e-04
rs1772150 chr1:205727468 NUCKS1 [+8064bp] All: C 108,990 15 G vs. A 0.008 (G) 0.183 (G) 0.85 (0.78-0.93) 1 (0-54) 2.27e-04
rs823117 chr1:205723513 NUCKS1 [+4109bp] C - 13 A vs. T 0.0 (T) 0.175 (T) >1 (-) 13 (-) <0.05
rs823146 chr1:205732814 RAB7L1 [-4300bp] C - 13 C vs. G 0.008 (C) 0.167 (C) <1 (-) 17 (-) <0.05
rs823126 chr1:205728369 RAB7L1 [-8745bp] C - 13 C vs. G - - <1 (-) 20 (-) <0.05
rs823134 chr1:205737956 RAB7L1 C - 13 C vs. G 0.0 (G) 0.167 (G) >1 (-) 21 (-) <0.05
rs823113 chr1:205711237 NUCKS1 C - 13 C vs. G 0.008 (C) 0.175 (C) <1 (-) 14 (-) <0.05
rs823142 chr1:205741816 RAB7L1 C - 13 A vs. T - 0.167 (A) <1 (-) 15 (-) <0.05
rs823125 chr1:205727821 NUCKS1 [+8417bp] C - 13 C vs. G - - >1 (-) 23 (-) <0.05
rs1772152 chr1:205736662 RAB7L1 [-452bp] C - 13 A vs. T - 0.158 (T) >1 (-) 18 (-) <0.05
rs823157 chr1:205765795 SLC41A1 C - 13 A vs. T 0.108 (T) 0.242 (T) >1 (-) 15 (-) <0.05

Association studies for this region [+]