SIPA1L2, chr1:232533711-232697304 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs10797576 chr1:232664611 SIPA1L2 All: C 120,238 21 T vs. C 0.092 (T) 0.092 (T) 1.13 (1.09-1.18) 0 (0-41) 1.76e-10
Meta_image?name=rs10797576

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs114013002 chr1:232551500 SIPA1L2 C - 13 T vs. C 0.058 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs646022 chr1:232499424 SIPA1L2 [-34287bp] C - 13 A vs. G 0.475 (G) 0.233 (G) >1 (-) 33 (-) >0.05
rs10910556 chr1:232687602 SIPA1L2 C - 11 A vs. T 0.05 (A) 0.467 (A) >1 (-) 0 (-) >0.05
rs61823262 chr1:232740226 SIPA1L2 [+42922bp] C - 10 T vs. C 0.025 (C) - >1 (-) 26 (-) >0.05
rs10910562 chr1:232723078 SIPA1L2 [+25774bp] C - 13 A vs. G 0.467 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs573140 chr1:232577281 SIPA1L2 C - 13 T vs. G 0.333 (G) 0.142 (G) <1 (-) 0 (-) >0.05
rs77942833 chr1:232569782 SIPA1L2 C - 8 T vs. G - 0.492 (G) >1 (-) 28 (-) >0.05
rs34110867 chr1:232564162 SIPA1L2 C - 13 T vs. C - 0.058 (C) <1 (-) 0 (-) >0.05
rs1334403 chr1:232724842 SIPA1L2 [+27538bp] C - 13 A vs. T 0.225 (T) 0.05 (T) >1 (-) 22 (-) >0.05
rs1931599 chr1:232720201 SIPA1L2 [+22897bp] C - 13 A vs. G 0.475 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs13376102 chr1:232722759 SIPA1L2 [+25455bp] C - 13 T vs. C 0.467 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs146140996 chr1:232714940 SIPA1L2 [+17636bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs148837119 chr1:232514963 SIPA1L2 [-18748bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs12140036 chr1:232722826 SIPA1L2 [+25522bp] C - 13 A vs. C 0.467 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs7550495 chr1:232723529 SIPA1L2 [+26225bp] C - 13 A vs. C 0.225 (C) 0.075 (C) >1 (-) 22 (-) >0.05
rs6672466 chr1:232729589 SIPA1L2 [+32285bp] C - 12 T vs. C 0.417 (C) 0.075 (C) >1 (-) 8 (-) >0.05
rs4649390 chr1:232727572 SIPA1L2 [+30268bp] C - 13 A vs. G 0.225 (A) 0.075 (A) <1 (-) 22 (-) >0.05
rs72761331 chr1:232625550 SIPA1L2 C - 12 A vs. C 0.033 (A) - <1 (-) 7 (-) >0.05
rs7556195 chr1:232732965 SIPA1L2 [+35661bp] C - 13 A vs. G 0.208 (G) 0.075 (G) <1 (-) 21 (-) >0.05
rs12043622 chr1:232741207 SIPA1L2 [+43903bp] C - 13 A vs. G 0.4 (G) 0.267 (G) >1 (-) 0 (-) >0.05
rs75707990 chr1:232496108 SIPA1L2 [-37603bp] C - 9 T vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs148976050 chr1:232490578 SIPA1L2 [-43133bp] C - 7 A vs. G - - <1 (-) 0 (-) >0.05
rs4418536 chr1:232545053 SIPA1L2 C - 9 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs79847156 chr1:232550300 SIPA1L2 C - 13 C vs. G - 0.4 (G) <1 (-) 13 (-) >0.05
rs12751881 chr1:232544836 SIPA1L2 C - 12 A vs. T 0.017 (A) - >1 (-) 0 (-) >0.05
rs114852164 chr1:232508623 SIPA1L2 [-25088bp] C - 9 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs12124432 chr1:232635368 SIPA1L2 C - 13 T vs. C 0.242 (C) 0.133 (C) >1 (-) 3 (-) >0.05
rs2225938 chr1:232500475 SIPA1L2 [-33236bp] C - 13 A vs. T 0.258 (T) 0.367 (A) >1 (-) 0 (-) >0.05
rs150385319 chr1:232508793 SIPA1L2 [-24918bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs79425505 chr1:232682165 SIPA1L2 C - 6 T vs. C 0.083 (C) - <1 (-) 0 (-) >0.05
rs75186170 chr1:232537173 SIPA1L2 C - 11 T vs. C - 0.342 (C) >1 (-) 22 (-) >0.05
rs116444541 chr1:232527108 SIPA1L2 [-6603bp] C - 11 A vs. G 0.017 (A) - <1 (-) 0 (-) >0.05
rs144454181 chr1:232505710 SIPA1L2 [-28001bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs789655 chr1:232697340 SIPA1L2 [+36bp] C - 10 T vs. C - - >1 (-) 14 (-) >0.05
rs78125098 chr1:232549584 SIPA1L2 C - 13 A vs. T 0.033 (T) 0.342 (A) >1 (-) 15 (-) >0.05
rs11810061 chr1:232721837 SIPA1L2 [+24533bp] C - 13 T vs. G 0.467 (T) 0.242 (T) <1 (-) 0 (-) >0.05
rs789637 chr1:232677769 SIPA1L2 C - 13 T vs. C 0.1 (T) 0.442 (T) <1 (-) 0 (-) >0.05
rs75174409 chr1:232495078 SIPA1L2 [-38633bp] C - 13 A vs. G - - >1 (-) 22 (-) >0.05
rs789360 chr1:232491315 SIPA1L2 [-42396bp] C - 13 A vs. C 0.4 (A) 0.275 (C) >1 (-) 6 (-) >0.05
rs76368147 chr1:232494670 SIPA1L2 [-39041bp] C - 13 A vs. T 0.017 (T) - <1 (-) 22 (-) >0.05
chr1:232509706 chr1:232509706 SIPA1L2 [-24005bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs116512219 chr1:232542982 SIPA1L2 C - 11 T vs. C 0.008 (C) - >1 (-) 28 (-) >0.05
rs10797580 chr1:232722151 SIPA1L2 [+24847bp] C - 13 T vs. G 0.467 (G) 0.242 (G) >1 (-) 0 (-) >0.05
rs643547 chr1:232531455 SIPA1L2 [-2256bp] C - 13 A vs. G 0.467 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs789359 chr1:232491286 SIPA1L2 [-42425bp] C - 13 A vs. T 0.417 (A) 0.275 (T) >1 (-) 5 (-) >0.05
rs12403898 chr1:232699798 SIPA1L2 [+2494bp] C - 13 A vs. G - - >1 (-) 28 (-) >0.05
rs12569188 chr1:232551416 SIPA1L2 C - 13 A vs. G 0.367 (A) 0.467 (G) >1 (-) 0 (-) >0.05
rs1931597 chr1:232720466 SIPA1L2 [+23162bp] C - 13 A vs. C 0.225 (C) 0.075 (C) >1 (-) 17 (-) >0.05
rs12409226 chr1:232723009 SIPA1L2 [+25705bp] C - 13 C vs. G 0.467 (C) 0.242 (C) <1 (-) 0 (-) >0.05
rs75490117 chr1:232492747 SIPA1L2 [-40964bp] C - 13 A vs. G 0.017 (A) - >1 (-) 22 (-) >0.05

Association studies for this region [+]