SCARB2, chr4:77079890-77135046 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56277851 chr4:77146872 FAM47E All: C 108,990 15 G vs. A 0.2 (G) 0.15 (A) 1.12 (1.08-1.17) 0 (0-22) 1.24e-09
Meta_image?name=rs56277851

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6819794 chr4:77178379 FAM47E C - 13 A vs. G 0.35 (A) 0.05 (G) >1 (-) 25 (-) >0.05
rs12646634 chr4:77180816 FAM47E C - 13 T vs. G 0.067 (G) 0.333 (G) <1 (-) 37 (-) >0.05
rs7668413 chr4:77030537 ART3 C - 13 T vs. C 0.375 (C) 0.492 (T) >1 (-) 0 (-) >0.05
rs7678980 chr4:77030011 ART3 C - 13 A vs. G 0.367 (A) 0.442 (G) <1 (-) 0 (-) >0.05
rs7678836 chr4:77029981 ART3 C - 13 T vs. G 0.367 (T) 0.483 (G) <1 (-) 0 (-) >0.05
rs6835324 chr4:77117309 SCARB2 C - 13 A vs. G 0.1 (A) 0.033 (A) <1 (-) 2 (-) >0.05
rs12499900 chr4:77060869 NUP54 C - 13 C vs. G 0.083 (C) 0.175 (C) >1 (-) 4 (-) >0.05
rs4241582 chr4:77030929 ART3 C - 13 A vs. G 0.375 (G) 0.45 (A) >1 (-) 0 (-) >0.05
rs4241583 chr4:77030971 ART3 C - 13 T vs. C 0.375 (T) 0.442 (C) <1 (-) 0 (-) >0.05
rs61750814 chr4:77053834 NUP54 C - 13 T vs. C 0.108 (C) 0.033 (C) >1 (-) 17 (-) >0.05
rs12645639 chr4:77053488 NUP54 C - 13 T vs. C 0.083 (T) 0.15 (T) >1 (-) 2 (-) >0.05
rs12648162 chr4:77053202 NUP54 C - 13 A vs. G 0.083 (G) 0.175 (G) <1 (-) 2 (-) >0.05
rs12648709 chr4:77052849 NUP54 C - 13 T vs. C 0.083 (C) 0.158 (C) <1 (-) 2 (-) >0.05
rs72655539 chr4:77128724 SCARB2 C - 13 A vs. G 0.108 (A) 0.033 (A) <1 (-) 2 (-) >0.05
rs114494889 chr4:77083314 SCARB2 C - 10 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs3816248 chr4:77101068 SCARB2 C - 13 T vs. C 0.133 (C) 0.292 (C) >1 (-) 5 (-) >0.05
rs12646166 chr4:77050293 NUP54 C - 13 T vs. C 0.083 (C) 0.167 (C) <1 (-) 2 (-) >0.05
rs59050354 chr4:77035018 NUP54 [-794bp] C - 13 A vs. G 0.083 (A) 0.175 (A) >1 (-) 3 (-) >0.05
rs17001573 chr4:77099384 SCARB2 C - 13 A vs. G 0.142 (G) 0.3 (G) >1 (-) 3 (-) >0.05
rs4376175 chr4:77057905 NUP54 C - 13 T vs. G 0.108 (T) 0.075 (T) <1 (-) 26 (-) >0.05
rs4859617 chr4:77049684 NUP54 C - 13 A vs. G 0.083 (A) 0.175 (A) >1 (-) 2 (-) >0.05
rs4859618 chr4:77050100 NUP54 C - 13 A vs. G 0.083 (A) 0.175 (A) >1 (-) 2 (-) >0.05
rs28563976 chr4:77097373 SCARB2 C - 13 A vs. C 0.142 (C) 0.333 (C) >1 (-) 4 (-) >0.05
rs7689378 chr4:77034355 ART3 [+400bp] C - 13 A vs. G 0.083 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs34978911 chr4:77032284 ART3 C - 13 A vs. C 0.083 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs61153596 chr4:77048199 NUP54 C - 13 A vs. G 0.083 (G) 0.183 (G) <1 (-) 1 (-) >0.05
rs28590424 chr4:77047219 NUP54 C - 13 T vs. G 0.083 (T) 0.183 (T) >1 (-) 1 (-) >0.05
rs116314995 chr4:77050224 NUP54 C - 11 T vs. G - - >1 (-) 0 (-) >0.05
rs7673428 chr4:77043934 NUP54 C - 13 T vs. C 0.083 (C) 0.158 (C) <1 (-) 1 (-) >0.05
rs11097262 chr4:77114936 SCARB2 C - 13 T vs. C 0.142 (T) 0.308 (T) <1 (-) 1 (-) >0.05
rs13141802 chr4:77034594 ART3 [+639bp] C - 13 C vs. G 0.083 (C) 0.175 (C) >1 (-) 1 (-) >0.05
rs34072573 chr4:77041771 NUP54 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs35713908 chr4:77032019 ART3 C - 13 T vs. C 0.083 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs17001416 chr4:77031799 ART3 C - 13 T vs. G 0.083 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs1127705 chr4:77036122 NUP54 C - 13 T vs. C 0.083 (C) 0.175 (C) <1 (-) 1 (-) >0.05
rs4859426 chr4:77037045 NUP54 C - 13 T vs. C 0.083 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs11941820 chr4:77066336 NUP54 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs28726273 chr4:77056904 NUP54 C - 13 A vs. G 0.175 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs34019987 chr4:77041827 NUP54 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4859425 chr4:77037011 NUP54 C - 13 T vs. G 0.083 (G) 0.183 (G) <1 (-) 1 (-) >0.05
rs2197104 chr4:77067389 NUP54 C - 13 A vs. G 0.167 (G) 0.317 (G) >1 (-) 0 (-) >0.05
rs28857291 chr4:77043979 NUP54 C - 13 T vs. C 0.167 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs13152491 chr4:77044518 NUP54 C - 13 A vs. G 0.175 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs28600676 chr4:77047914 NUP54 C - 13 T vs. C 0.2 (C) 0.283 (C) >1 (-) 0 (-) >0.05
rs28635901 chr4:77049012 NUP54 C - 13 A vs. G 0.175 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs4552491 chr4:77048538 NUP54 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs4263427 chr4:77054706 NUP54 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs13115827 chr4:77039352 NUP54 C - 13 A vs. G 0.183 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs28611472 chr4:77058518 NUP54 C - 13 T vs. C 0.167 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs72655523 chr4:77054154 NUP54 C - 13 A vs. G 0.108 (A) 0.042 (A) <1 (-) 26 (-) >0.05

Association studies for this region [+]