MTX1, chr1:155178490-155183615 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs35749011 chr1:155135036 KRTCAP2 [-6848bp] All: C 104,595 13 G vs. A - - 0.57 (0.51-0.64) 0 (0-23) 6.10e-23
Meta_image?name=rs35749011

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs139111003 chr1:155217473 FAM189B C - 5 T vs. C - - <1 (-) 25 (-) >0.05
rs140342156 chr1:155202147 GBA [-2096bp] C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs2974931 chr1:155195215 GBA [-9028bp] C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs1142287 chr1:155230131 SCAMP3 C - 13 T vs. C 0.275 (T) 0.275 (C) >1 (-) 0 (-) >0.05
rs2242576 chr1:155231545 SCAMP3 C - 13 T vs. G 0.275 (G) 0.267 (T) <1 (-) 0 (-) >0.05
rs4971101 chr1:155157635 TRIM46 [+188bp] C - 12 A vs. G 0.458 (A) 0.217 (G) >1 (-) 11 (-) >0.05
rs11809549 chr1:155143399 KRTCAP2 C - 7 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs2070803 chr1:155157715 TRIM46 [+268bp] C - 12 A vs. G 0.458 (G) 0.192 (A) <1 (-) 9 (-) >0.05
rs1046188 chr1:155232074 SCAMP3 C - 13 T vs. C 0.275 (T) 0.267 (C) >1 (-) 0 (-) >0.05
rs11264347 chr1:155229766 SCAMP3 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs423144 chr1:155169355 THBS3 C - 12 T vs. G - - >1 (-) 11 (-) >0.05
rs9729564 chr1:155229222 SCAMP3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs34542979 chr1:155133421 KRTCAP2 [-8463bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs72704130 chr1:155207030 GBA C - 5 A vs. G 0.042 (A) - <1 (-) 0 (-) >0.05
rs34106167 chr1:155129965 KRTCAP2 [-11919bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs12042020 chr1:155228046 SCAMP3 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs1546818 chr1:155219207 FAM189B C - 13 A vs. T 0.267 (T) 0.258 (A) <1 (-) 0 (-) >0.05
rs734074 chr1:155218446 FAM189B C - 13 A vs. G 0.267 (G) 0.258 (A) <1 (-) 0 (-) >0.05
rs2361536 chr1:155219625 FAM189B C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs741756 chr1:155219868 FAM189B C - 13 A vs. C 0.267 (A) 0.258 (C) >1 (-) 0 (-) >0.05
rs2072647 chr1:155221837 FAM189B C - 13 A vs. C 0.267 (A) 0.258 (C) >1 (-) 0 (-) >0.05
rs12748155 chr1:155222177 FAM189B C - 13 T vs. C 0.267 (T) - >1 (-) 0 (-) >0.05
rs2075568 chr1:155218168 FAM189B C - 13 T vs. C 0.267 (C) 0.258 (T) <1 (-) 0 (-) >0.05
rs734073 chr1:155218365 FAM189B C - 13 T vs. C 0.267 (C) 0.25 (T) <1 (-) 0 (-) >0.05
rs2075566 chr1:155224091 FAM189B C - 13 A vs. C 0.267 (A) 0.258 (C) >1 (-) 0 (-) >0.05
rs2242577 chr1:155224301 FAM189B C - 13 A vs. C 0.258 (A) 0.258 (C) >1 (-) 0 (-) >0.05
rs4043 chr1:155201190 GBA [-3053bp] C - 13 A vs. G 0.325 (A) - >1 (-) 1 (-) >0.05
rs9426886 chr1:155151754 TRIM46 C - 12 A vs. T 0.458 (T) 0.2 (A) <1 (-) 18 (-) >0.05
rs1045253 chr1:155201235 GBA [-3008bp] C - 13 A vs. G 0.325 (A) 0.275 (G) >1 (-) 1 (-) >0.05
rs11264341 chr1:155151493 TRIM46 C - 12 T vs. C 0.458 (T) 0.258 (C) >1 (-) 18 (-) >0.05
rs144875396 chr1:155141857 KRTCAP2 [-27bp] C - 5 T vs. C - - <1 (-) 18 (-) >0.05
chr1:155152763 chr1:155152763 TRIM46 C - 8 A vs. C - - <1 (-) 3 (-) >0.05
rs2990246 chr1:155197602 GBA [-6641bp] C - 12 C vs. G 0.425 (C) 0.192 (G) >1 (-) 34 (-) >0.05
rs4971099 chr1:155155608 TRIM46 C - 12 A vs. G - - <1 (-) 2 (-) >0.05
rs12743084 chr1:155161168 MUC1 C - 13 C vs. G - - <1 (-) 2 (-) >0.05
rs28595322 chr1:155201993 GBA [-2250bp] C - 13 A vs. G 0.325 (G) - <1 (-) 0 (-) >0.05
rs1807042 chr1:155218678 FAM189B C - 13 C vs. G 0.283 (G) - <1 (-) 0 (-) >0.05
rs28678003 chr1:155207733 GBA C - 13 T vs. C 0.05 (T) - <1 (-) 12 (-) >0.05
rs72704117 chr1:155175089 THBS3 C - 10 T vs. C 0.025 (T) - >1 (-) 13 (-) >0.05
rs10796940 chr1:155202689 GBA [-1554bp] C - 13 A vs. C 0.325 (C) 0.275 (A) <1 (-) 0 (-) >0.05
rs12723761 chr1:155200324 GBA [-3919bp] C - 13 T vs. G 0.317 (T) 0.275 (G) >1 (-) 0 (-) >0.05
rs3768566 chr1:155201064 GBA [-3179bp] C - 13 T vs. C 0.325 (T) 0.275 (C) >1 (-) 0 (-) >0.05
rs11264343 chr1:155199666 GBA [-4577bp] C - 13 T vs. C 0.325 (C) 0.283 (T) <1 (-) 0 (-) >0.05
rs56310840 chr1:155203060 GBA [-1183bp] C - 13 A vs. G 0.325 (A) 0.275 (G) >1 (-) 0 (-) >0.05
rs370545 chr1:155175390 THBS3 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs12407919 chr1:155199315 GBA [-4928bp] C - 13 C vs. G 0.325 (G) 0.275 (C) <1 (-) 0 (-) >0.05
rs2974937 chr1:155168849 THBS3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2066981 chr1:155172379 THBS3 C - 13 A vs. G 0.392 (G) 0.183 (G) >1 (-) 0 (-) >0.05
rs2075569 chr1:155209360 GBA C - 13 T vs. C 0.325 (T) 0.275 (C) >1 (-) 0 (-) >0.05
rs914615 chr1:155175892 THBS3 C - 13 A vs. G 0.4 (A) 0.183 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]