MCCC1, chr3:182733006-182833863 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12637471 chr3:182762437 MCCC1 All: C 120,238 21 A vs. G 0.242 (A) 0.417 (G) 0.84 (0.81-0.87) 35 (0-62) 5.38e-22
Meta_image?name=rs12637471

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs13059546 chr3:182823498 MCCC1 All: C 108,990 15 A vs. G 0.4 (A) 0.442 (G) 0.93 (0.90-0.97) 36 (0-66) 6.19e-05
rs7618801 chr3:182818776 MCCC1 All: C 108,990 15 A vs. G - - 1.07 (1.04-1.11) 37 (0-66) 6.55e-05
rs62293235 chr3:182826326 MCCC1 All: C 108,990 15 C vs. T 0.392 (C) 0.442 (T) 0.94 (0.90-0.97) 36 (0-65) 7.07e-05
rs11921884 chr3:182828245 MCCC1 All: C 108,990 15 T vs. G - - 1.07 (1.04-1.11) 36 (0-65) 7.13e-05
rs9838309 chr3:182712440 DCUN1D1 [+8699bp] C - 13 T vs. C 0.242 (C) 0.242 (T) >1 (-) 12 (-) <0.05
rs71314285 chr3:182878673 LAMP3 All: C 103,470 14 A vs. G 0.092 (A) 0.125 (A) 0.88 (0.83-0.94) 19 (0-57) 1.16e-04
rs13075011 chr3:182773125 MCCC1 C - 13 C vs. G 0.25 (G) 0.483 (G) >1 (-) 30 (-) <0.05
rs6764058 chr3:182723243 MCCC1 [-9763bp] C - 13 A vs. G 0.267 (A) 0.458 (A) <1 (-) 21 (-) <0.05
rs9841498 chr3:182727097 MCCC1 [-5909bp] C - 13 T vs. C 0.275 (T) 0.458 (T) <1 (-) 31 (-) <0.05
rs4074110 chr3:182728669 MCCC1 [-4337bp] C - 13 A vs. G 0.283 (A) 0.242 (G) <1 (-) 30 (-) <0.05
rs3772715 chr3:182849564 LAMP3 C - 13 T vs. C 0.283 (C) 0.442 (C) >1 (-) 25 (-) <0.05
rs491841 chr3:182849884 LAMP3 C - 13 A vs. G 0.275 (G) 0.442 (G) >1 (-) 27 (-) <0.05
rs6791884 chr3:182724406 MCCC1 [-8600bp] C - 13 A vs. G 0.275 (G) 0.233 (A) >1 (-) 17 (-) <0.05
rs13061424 chr3:182797309 MCCC1 C - 13 A vs. T 0.283 (T) 0.383 (A) >1 (-) 33 (-) <0.05
rs11711666 chr3:182772152 MCCC1 C - 13 T vs. G - - <1 (-) 28 (-) <0.05
rs2314738 chr3:182795910 MCCC1 C - 13 T vs. C - - >1 (-) 32 (-) <0.05
rs6806083 chr3:182804385 MCCC1 C - 13 A vs. G 0.292 (G) 0.383 (A) >1 (-) 32 (-) <0.05
rs55811245 chr3:182784407 MCCC1 C - 13 A vs. G 0.3 (A) 0.383 (G) <1 (-) 31 (-) <0.05
rs13097765 chr3:182766033 MCCC1 C - 13 T vs. C 0.283 (T) 0.392 (C) <1 (-) 25 (-) <0.05
rs2314737 chr3:182783344 MCCC1 C - 13 T vs. C 0.292 (C) 0.375 (T) >1 (-) 27 (-) <0.05
rs10937112 chr3:182800992 MCCC1 C - 13 T vs. G 0.283 (T) 0.4 (G) <1 (-) 31 (-) <0.05
rs13078931 chr3:182778941 MCCC1 C - 13 A vs. G 0.283 (G) 0.383 (A) >1 (-) 31 (-) <0.05
rs112519048 chr3:182771828 MCCC1 C - 13 T vs. C 0.242 (C) - >1 (-) 28 (-) <0.05
rs677950 chr3:182844349 LAMP3 C - 13 T vs. C 0.45 (T) 0.475 (C) <1 (-) 41 (-) <0.05
rs4558785 chr3:182836957 LAMP3 [-3044bp] C - 13 A vs. T 0.333 (A) 0.467 (T) <1 (-) 37 (-) <0.05
rs616035 chr3:182856597 LAMP3 C - 13 C vs. G 0.325 (C) 0.492 (G) <1 (-) 31 (-) <0.05
rs482912 chr3:182853670 LAMP3 C - 13 T vs. C 0.325 (T) 0.492 (C) <1 (-) 31 (-) <0.05
rs535651 chr3:182855352 LAMP3 C - 13 T vs. C 0.325 (T) 0.492 (C) <1 (-) 32 (-) <0.05
rs562013 chr3:182854814 LAMP3 C - 13 A vs. G 0.325 (G) 0.492 (A) >1 (-) 31 (-) <0.05
rs553548 chr3:182838542 LAMP3 [-1459bp] C - 13 C vs. G 0.333 (C) 0.475 (G) <1 (-) 37 (-) <0.05
rs663739 chr3:182852374 LAMP3 C - 13 T vs. G 0.325 (T) 0.492 (G) <1 (-) 30 (-) <0.05
rs7614849 chr3:182837327 LAMP3 [-2674bp] C - 13 T vs. G - - >1 (-) 36 (-) <0.05
rs604712 chr3:182839512 LAMP3 [-489bp] C - 13 T vs. C - - >1 (-) 36 (-) <0.05
rs598252 chr3:182854912 LAMP3 C - 13 T vs. C - - >1 (-) 32 (-) <0.05
rs552648 chr3:182857249 LAMP3 C - 13 A vs. T 0.325 (A) 0.483 (T) <1 (-) 31 (-) <0.05
rs535658 chr3:182855347 LAMP3 C - 13 T vs. C 0.325 (T) 0.492 (C) <1 (-) 33 (-) <0.05
rs677952 chr3:182844351 LAMP3 C - 13 T vs. C 0.408 (T) 0.475 (C) <1 (-) 36 (-) <0.05
rs573940 chr3:182848045 LAMP3 C - 13 C vs. G - - >1 (-) 35 (-) <0.05
rs1502762 chr3:182763580 MCCC1 C - 11 A vs. G 0.25 (G) 0.45 (G) >1 (-) 40 (-) <0.05
rs4859275 chr3:182814131 MCCC1 C - 13 A vs. T - - <1 (-) 42 (-) <0.05
rs4859276 chr3:182814824 MCCC1 C - 13 C vs. G 0.4 (G) 0.442 (C) >1 (-) 42 (-) <0.05
rs3732604 chr3:182810144 MCCC1 C - 13 T vs. G 0.367 (T) 0.425 (G) <1 (-) 24 (-) <0.05
rs6443851 chr3:182819049 MCCC1 C - 13 A vs. G - - <1 (-) 40 (-) <0.05
rs13077633 chr3:182879396 LAMP3 C - 12 T vs. C 0.092 (T) 0.125 (T) <1 (-) 18 (-) <0.05
rs71314284 chr3:182878255 LAMP3 C - 12 T vs. C 0.092 (T) 0.125 (T) <1 (-) 17 (-) <0.05
rs17803349 chr3:182878123 LAMP3 C - 12 T vs. C 0.092 (T) 0.125 (T) <1 (-) 17 (-) <0.05
rs13078394 chr3:182879648 LAMP3 C - 12 C vs. G 0.092 (C) 0.125 (C) <1 (-) 17 (-) <0.05
rs13077467 chr3:182879326 LAMP3 C - 12 C vs. G - - >1 (-) 17 (-) <0.05
rs3811729 chr3:182880480 LAMP3 C - 12 A vs. G 0.083 (G) 0.1 (G) >1 (-) 17 (-) <0.05
rs76694075 chr3:182883826 LAMP3 [+2199bp] C - 12 T vs. G 0.1 (T) 0.083 (T) <1 (-) 11 (-) <0.05

Association studies for this region [+]