MAPT, chr17:43971748-44105700 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17649553 chr17:43994648 MAPT All: C 114,483 20 T vs. C 0.217 (T) - 0.77 (0.75-0.80) 0 (0-37) 6.11e-49
Meta_image?name=rs17649553

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11575896 chr17:43972142 MAPT C - 12 A vs. G 0.192 (A) - <1 (-) 0 (-) <5.00e-08
rs12373139 chr17:43924130 SPPL2C C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs12185233 chr17:43923654 SPPL2C C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs12150235 chr17:44015745 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs55942528 chr17:43932028 SPPL2C [+7590bp] C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs56317731 chr17:44032073 MAPT C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs111751251 chr17:44042951 MAPT C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs56254732 chr17:43932049 SPPL2C [+7611bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08
rs62056781 chr17:43973899 MAPT C - 12 T vs. C 0.225 (C) - >1 (-) 0 (-) <5.00e-08
rs62063263 chr17:44033394 MAPT C - 12 C vs. G 0.2 (C) - <1 (-) 0 (-) <5.00e-08
rs62063264 chr17:44033401 MAPT C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs12150104 chr17:44015929 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062275 chr17:44093496 MAPT C - 12 A vs. G 0.183 (G) - >1 (-) 0 (-) <5.00e-08
rs12373124 chr17:43924219 SPPL2C C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs62063801 chr17:44069376 MAPT C - 12 T vs. G - - <1 (-) 0 (-) <5.00e-08
rs62056779 chr17:43971937 MAPT C - 12 A vs. C 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs112950348 chr17:44033188 MAPT C - 12 A vs. G - - <1 (-) 0 (-) <5.00e-08
rs56040418 chr17:43958079 MAPT [-13669bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs62056778 chr17:43971604 MAPT [-144bp] C - 12 C vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62063262 chr17:44033002 MAPT C - 12 T vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs17691466 chr17:43968219 MAPT [-3529bp] C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs78555354 chr17:44032879 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs9709338 chr17:44094871 MAPT C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62061728 chr17:44017180 MAPT C - 12 T vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs56269136 chr17:43926992 SPPL2C [+2554bp] C - 12 T vs. C 0.225 (T) - <1 (-) 0 (-) <5.00e-08
rs62054823 chr17:43929029 SPPL2C [+4591bp] C - 12 A vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs62061730 chr17:44017342 MAPT C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs62054824 chr17:43929992 SPPL2C [+5554bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs2873268 chr17:43930955 SPPL2C [+6517bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs17770296 chr17:43969136 MAPT [-2612bp] C - 12 T vs. C 0.208 (T) - <1 (-) 0 (-) <5.00e-08
rs55821155 chr17:44032470 MAPT C - 12 C vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs76594404 chr17:43971457 MAPT [-291bp] C - 12 C vs. G 0.2 (C) - <1 (-) 0 (-) <5.00e-08
rs80233201 chr17:43971481 MAPT [-267bp] C - 12 T vs. C 0.233 (C) - >1 (-) 0 (-) <5.00e-08
rs113277432 chr17:44033169 MAPT C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs62054819 chr17:43926149 SPPL2C [+1711bp] C - 12 A vs. G 0.225 (G) - >1 (-) 0 (-) <5.00e-08
rs55946323 chr17:44031946 MAPT C - 12 A vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs2316769 chr17:43930798 SPPL2C [+6360bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs10445365 chr17:43932789 SPPL2C [+8351bp] C - 12 T vs. C 0.142 (T) - <1 (-) 0 (-) <5.00e-08
rs55751924 chr17:43932155 SPPL2C [+7717bp] C - 12 A vs. G 0.192 (G) - >1 (-) 0 (-) <5.00e-08
rs62061725 chr17:44016157 MAPT C - 12 C vs. G 0.217 (C) - <1 (-) 0 (-) <5.00e-08
rs55877243 chr17:43969019 MAPT [-2729bp] C - 12 T vs. C - - >1 (-) 0 (-) <5.00e-08
rs113537106 chr17:44016462 MAPT C - 12 A vs. G - - >1 (-) 0 (-) <5.00e-08
rs62062284 chr17:44095570 MAPT C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs62062292 chr17:44099809 MAPT C - 12 A vs. C 0.217 (C) - >1 (-) 0 (-) <5.00e-08
rs17690661 chr17:43924521 SPPL2C [+83bp] C - 12 A vs. G 0.217 (A) - <1 (-) 0 (-) <5.00e-08
rs55943825 chr17:43924776 SPPL2C [+338bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs17690679 chr17:43924803 SPPL2C [+365bp] C - 12 A vs. G 0.217 (G) - >1 (-) 0 (-) <5.00e-08
rs4340365 chr17:43930980 SPPL2C [+6542bp] C - 12 T vs. C 0.217 (T) - <1 (-) 0 (-) <5.00e-08
rs113093579 chr17:43934116 SPPL2C [+9678bp] C - 12 T vs. G 0.2 (G) - >1 (-) 0 (-) <5.00e-08
rs62054831 chr17:43932381 SPPL2C [+7943bp] C - 12 T vs. C - - <1 (-) 0 (-) <5.00e-08

Association studies for this region [+]