LSM7, chr19:2321516-2328619 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2854112 chr19:2273836 OAZ1 [+349bp] C - 11 T vs. C 0.35 (C) 0.367 (T) <1 (-) 0 (-) >0.05
rs116703616 chr19:2335525 LSM7 [+6906bp] C - 11 T vs. C 0.108 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs7254381 chr19:2305765 LINGO3 C - 11 T vs. G 0.242 (G) 0.383 (T) <1 (-) 49 (-) >0.05
rs11878710 chr19:2336008 LSM7 [+7389bp] C - 11 T vs. C 0.108 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs118084321 chr19:2332323 LSM7 [+3704bp] C - 11 A vs. G 0.108 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs115510080 chr19:2336109 LSM7 [+7490bp] C - 11 A vs. G 0.108 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs143502226 chr19:2335669 LSM7 [+7050bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs117619473 chr19:2335452 LSM7 [+6833bp] C - 11 T vs. C 0.108 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs8101666 chr19:2370491 TMPRSS9 [-19278bp] C - 11 A vs. C 0.1 (A) 0.267 (A) >1 (-) 3 (-) >0.05
rs62120681 chr19:2372188 TMPRSS9 [-17581bp] C - 11 A vs. T 0.033 (A) 0.3 (A) >1 (-) 0 (-) >0.05
rs2302057 chr19:2324060 LSM7 C - 10 A vs. G 0.15 (A) - >1 (-) 30 (-) >0.05
rs2158263 chr19:2281997 C19orf35 C - 11 C vs. G 0.242 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs8103741 chr19:2325005 LSM7 C - 10 A vs. G 0.192 (G) 0.225 (G) <1 (-) 27 (-) >0.05
rs2385175 chr19:2371513 TMPRSS9 [-18256bp] C - 11 T vs. C 0.1 (C) 0.317 (C) <1 (-) 6 (-) >0.05
rs73520573 chr19:2335169 LSM7 [+6550bp] C - 11 T vs. G 0.1 (G) 0.05 (G) >1 (-) 0 (-) >0.05
rs2270048 chr19:2326215 LSM7 C - 10 T vs. C 0.183 (T) 0.217 (T) >1 (-) 27 (-) >0.05
rs886883 chr19:2326988 LSM7 C - 10 C vs. G 0.183 (C) 0.208 (C) >1 (-) 26 (-) >0.05
rs11668896 chr19:2278007 C19orf35 C - 10 T vs. C - - >1 (-) 15 (-) >0.05
rs12977539 chr19:2368414 TMPRSS9 [-21355bp] C - 12 A vs. G 0.292 (G) 0.283 (G) <1 (-) 0 (-) >0.05
rs7254747 chr19:2304775 LINGO3 C - 11 T vs. C - - >1 (-) 44 (-) >0.05
rs7249452 chr19:2369283 TMPRSS9 [-20486bp] C - 12 C vs. G 0.283 (C) 0.3 (C) >1 (-) 0 (-) >0.05
rs11671102 chr19:2277987 C19orf35 C - 10 C vs. G - - >1 (-) 16 (-) >0.05
rs8113255 chr19:2306653 LINGO3 C - 11 A vs. G 0.217 (A) 0.4 (A) >1 (-) 47 (-) >0.05
rs1865123 chr19:2376583 TMPRSS9 [-13186bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs115892676 chr19:2335822 LSM7 [+7203bp] C - 11 T vs. G 0.117 (T) - <1 (-) 0 (-) >0.05
rs4806838 chr19:2327856 LSM7 C - 10 C vs. G 0.175 (C) 0.208 (C) >1 (-) 26 (-) >0.05
rs12976963 chr19:2303276 LINGO3 C - 11 A vs. G 0.258 (A) 0.383 (G) >1 (-) 50 (-) >0.05
rs1865122 chr19:2376674 TMPRSS9 [-13095bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs8108067 chr19:2304359 LINGO3 C - 11 T vs. C 0.25 (T) 0.375 (C) >1 (-) 49 (-) >0.05
rs11667839 chr19:2307341 LINGO3 C - 11 T vs. G 0.217 (T) 0.417 (T) >1 (-) 47 (-) >0.05
rs2891697 chr19:2371245 TMPRSS9 [-18524bp] C - 11 A vs. G 0.1 (A) 0.342 (A) >1 (-) 4 (-) >0.05
rs66470457 chr19:2370774 TMPRSS9 [-18995bp] C - 11 A vs. T 0.083 (A) 0.342 (A) >1 (-) 11 (-) >0.05
rs60680600 chr19:2307960 LINGO3 C - 11 A vs. G 0.292 (G) 0.408 (G) <1 (-) 46 (-) >0.05
rs10418405 chr19:2296098 LINGO3 C - 11 C vs. G 0.192 (C) 0.108 (C) >1 (-) 4 (-) >0.05
rs1978726 chr19:2375953 TMPRSS9 [-13816bp] C - 11 T vs. C 0.092 (C) 0.333 (C) <1 (-) 4 (-) >0.05
rs62120682 chr19:2373322 TMPRSS9 [-16447bp] C - 11 A vs. G - - >1 (-) 20 (-) >0.05
rs8100329 chr19:2303158 LINGO3 C - 11 C vs. G 0.225 (C) 0.417 (C) >1 (-) 46 (-) >0.05
rs12462019 chr19:2295984 LINGO3 C - 11 C vs. G 0.2 (G) 0.092 (G) <1 (-) 2 (-) >0.05
rs11667219 chr19:2277988 C19orf35 C - 11 A vs. G - - >1 (-) 16 (-) >0.05
rs12977540 chr19:2303462 LINGO3 C - 11 A vs. G 0.192 (A) 0.4 (A) >1 (-) 47 (-) >0.05
rs8110383 chr19:2302801 LINGO3 C - 11 A vs. G 0.175 (G) 0.4 (G) <1 (-) 47 (-) >0.05
rs2385177 chr19:2371580 TMPRSS9 [-18189bp] C - 11 T vs. C 0.1 (T) 0.342 (T) >1 (-) 8 (-) >0.05
rs4134441 chr19:2371649 TMPRSS9 [-18120bp] C - 11 C vs. G 0.1 (G) - <1 (-) 5 (-) >0.05
rs8101137 chr19:2297369 LINGO3 C - 11 T vs. C - - >1 (-) 9 (-) >0.05
rs140630995 chr19:2314894 LSM7 [-6622bp] C - 6 T vs. G - - >1 (-) 0 (-) >0.05
rs11879876 chr19:2295629 LINGO3 C - 11 T vs. G - - >1 (-) 3 (-) >0.05
rs1978143 chr19:2372921 TMPRSS9 [-16848bp] C - 11 C vs. G 0.1 (C) 0.342 (C) >1 (-) 7 (-) >0.05
rs4807244 chr19:2372238 TMPRSS9 [-17531bp] C - 11 A vs. G 0.1 (A) 0.342 (A) >1 (-) 7 (-) >0.05
rs74788173 chr19:2287530 LINGO3 [-2244bp] C - 11 A vs. T 0.117 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs4807243 chr19:2372213 TMPRSS9 [-17556bp] C - 11 T vs. C 0.1 (C) 0.342 (C) <1 (-) 7 (-) >0.05

Association studies for this region [+]