LSM7, chr19:2321516-2328619 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62120679 chr19:2363319 TMPRSS9 [-26450bp] All: C 99,286 13 T vs. C 0.292 (T) 0.3 (C) 1.14 (1.09-1.19) 47 (0-72) 2.52e-09
Meta_image?name=rs62120679

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs116991497 chr19:2357819 LSM7 [+29200bp] C - 11 A vs. G 0.108 (G) - >1 (-) 0 (-) <0.05
rs12973488 chr19:2333089 LSM7 [+4470bp] C - 12 T vs. G - - <1 (-) 49 (-) <0.05
rs28645435 chr19:2317988 LSM7 [-3528bp] C - 11 T vs. C 0.05 (T) 0.442 (T) >1 (-) 43 (-) <0.05
rs7255529 chr19:2305592 LINGO3 C - 11 A vs. G 0.408 (A) 0.408 (G) >1 (-) 35 (-) <0.05
rs3746287 chr19:2340046 LSM7 [+11427bp] C - 12 T vs. C 0.425 (T) 0.25 (T) <1 (-) 53 (-) <0.05
rs143289737 chr19:2352296 LSM7 [+23677bp] C - 11 A vs. G - - >1 (-) 18 (-) <0.05
rs12460384 chr19:2340235 LSM7 [+11616bp] C - 12 T vs. C 0.425 (T) 0.233 (T) <1 (-) 52 (-) <0.05
rs8113393 chr19:2315553 LSM7 [-5963bp] C - 11 T vs. C 0.058 (T) 0.392 (T) >1 (-) 42 (-) <0.05
rs12609208 chr19:2352757 LSM7 [+24138bp] C - 11 A vs. G 0.05 (A) - <1 (-) 0 (-) <0.05
rs8112783 chr19:2315740 LSM7 [-5776bp] C - 11 T vs. G 0.058 (T) 0.392 (T) >1 (-) 40 (-) <0.05
rs4807225 chr19:2315387 LSM7 [-6129bp] C - 11 T vs. C 0.058 (T) 0.4 (T) >1 (-) 40 (-) <0.05
rs28435559 chr19:2316418 LSM7 [-5098bp] C - 11 A vs. G 0.058 (A) 0.4 (A) >1 (-) 39 (-) <0.05
rs4807224 chr19:2315236 LSM7 [-6280bp] C - 11 C vs. G 0.058 (C) 0.4 (C) >1 (-) 40 (-) <0.05
rs139165244 chr19:2374399 TMPRSS9 [-15370bp] C - 11 T vs. C - - >1 (-) 15 (-) <0.05
rs12461457 chr19:2367395 TMPRSS9 [-22374bp] C - 11 T vs. C 0.408 (C) 0.05 (C) >1 (-) 33 (-) <0.05
rs146252472 chr19:2374397 TMPRSS9 [-15372bp] C - 11 T vs. C - - >1 (-) 15 (-) <0.05
rs10405378 chr19:2361718 TMPRSS9 [-28051bp] C - 10 C vs. G 0.5 (G) 0.275 (C) <1 (-) 45 (-) <0.05
rs11084933 chr19:2335370 LSM7 [+6751bp] C - 12 T vs. C - - <1 (-) 51 (-) <0.05
rs143367040 chr19:2345099 LSM7 [+16480bp] C - 5 A vs. G - - >1 (-) 36 (-) <0.05
rs62120683 chr19:2373547 TMPRSS9 [-16222bp] C - 11 C vs. G - - >1 (-) 0 (-) <0.05
rs6510660 chr19:2372184 TMPRSS9 [-17585bp] C - 12 A vs. G 0.367 (A) 0.358 (G) >1 (-) 0 (-) <0.05
rs8102051 chr19:2370476 TMPRSS9 [-19293bp] C - 12 A vs. C 0.358 (C) 0.375 (A) <1 (-) 0 (-) <0.05
rs72987495 chr19:2366242 TMPRSS9 [-23527bp] C - 11 T vs. G 0.183 (T) 0.267 (T) >1 (-) 45 (-) <0.05
rs12610725 chr19:2343845 LSM7 [+15226bp] C - 11 T vs. C 0.108 (T) 0.042 (T) <1 (-) 0 (-) <0.05
rs12610598 chr19:2343630 LSM7 [+15011bp] C - 11 A vs. G 0.092 (A) - <1 (-) 0 (-) <0.05
rs2523177 chr19:2274578 C19orf35 [-53bp] C - 11 T vs. C 0.217 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs117849041 chr19:2312903 LINGO3 [+4747bp] C - 10 T vs. C 0.092 (T) - >1 (-) 31 (-) >0.05
rs8108923 chr19:2305651 LINGO3 C - 11 T vs. C 0.333 (T) 0.2 (T) >1 (-) 35 (-) >0.05
rs12982784 chr19:2346882 LSM7 [+18263bp] C - 11 T vs. C 0.458 (T) 0.092 (T) <1 (-) 23 (-) >0.05
rs886881 chr19:2321854 LSM7 C - 12 C vs. G 0.267 (G) 0.308 (C) <1 (-) 51 (-) >0.05
rs10409063 chr19:2276710 C19orf35 C - 11 T vs. C 0.217 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs117324377 chr19:2339975 LSM7 [+11356bp] C - 11 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs115062290 chr19:2324667 LSM7 C - 4 C vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs11883146 chr19:2339702 LSM7 [+11083bp] C - 11 T vs. C 0.117 (T) - <1 (-) 0 (-) >0.05
rs12984128 chr19:2325360 LSM7 C - 11 A vs. G 0.367 (A) 0.267 (G) >1 (-) 56 (-) >0.05
rs34070908 chr19:2335872 LSM7 [+7253bp] C - 11 T vs. C 0.267 (T) 0.233 (T) <1 (-) 6 (-) >0.05
rs62119711 chr19:2296903 LINGO3 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs112838075 chr19:2373511 TMPRSS9 [-16258bp] C - 9 T vs. C - - <1 (-) 15 (-) >0.05
rs76320124 chr19:2373534 TMPRSS9 [-16235bp] C - 10 T vs. C - - <1 (-) 20 (-) >0.05
rs2074458 chr19:2271741 OAZ1 C - 11 A vs. G 0.342 (G) 0.342 (A) <1 (-) 0 (-) >0.05
rs145026607 chr19:2335624 LSM7 [+7005bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs75527053 chr19:2338601 LSM7 [+9982bp] C - 11 C vs. G 0.117 (G) 0.067 (G) >1 (-) 0 (-) >0.05
rs28718565 chr19:2316597 LSM7 [-4919bp] C - 12 T vs. C 0.233 (C) 0.325 (T) <1 (-) 34 (-) >0.05
rs8109162 chr19:2309034 LINGO3 [+878bp] C - 11 A vs. G 0.075 (A) 0.383 (A) >1 (-) 47 (-) >0.05
rs34741325 chr19:2338171 LSM7 [+9552bp] C - 11 A vs. G 0.125 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs7253263 chr19:2317060 LSM7 [-4456bp] C - 12 A vs. G - - <1 (-) 45 (-) >0.05
rs4807227 chr19:2318180 LSM7 [-3336bp] C - 12 T vs. C 0.275 (C) 0.325 (T) <1 (-) 45 (-) >0.05
rs12984135 chr19:2367458 TMPRSS9 [-22311bp] C - 12 A vs. T 0.292 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs78720096 chr19:2336737 LSM7 [+8118bp] C - 11 A vs. G 0.117 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs730417 chr19:2317666 LSM7 [-3850bp] C - 12 T vs. C 0.275 (C) 0.325 (T) <1 (-) 45 (-) >0.05

Association studies for this region [+]