LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11611510 chr12:40779894 MUC19 [-7303bp] C - 13 A vs. G 0.392 (G) 0.325 (G) >1 (-) 23 (-) >0.05
rs12230935 chr12:40782188 MUC19 [-5009bp] C - 13 A vs. G 0.083 (A) 0.208 (A) >1 (-) 41 (-) >0.05
rs2971187 chr12:40570385 LRRK2 [-20161bp] C - 13 A vs. G 0.25 (G) 0.342 (G) >1 (-) 17 (-) >0.05
rs1817817 chr12:40627004 LRRK2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs10784575 chr12:40779003 MUC19 [-8194bp] C - 13 T vs. G 0.308 (G) 0.125 (G) >1 (-) 0 (-) >0.05
rs1463719 chr12:40543693 SLC2A13 [+43802bp] C - 13 T vs. C 0.442 (C) 0.325 (T) >1 (-) 0 (-) >0.05
rs12368227 chr12:40747434 LRRK2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs11564156 chr12:40562046 LRRK2 [-28500bp] C - 12 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs2723268 chr12:40628586 LRRK2 C - 13 T vs. G 0.075 (G) 0.283 (G) >1 (-) 0 (-) >0.05
rs11176153 chr12:40745838 LRRK2 C - 13 T vs. C 0.167 (C) 0.233 (C) <1 (-) 46 (-) >0.05
rs10437934 chr12:40551044 LRRK2 [-39502bp] C - 13 T vs. C 0.175 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs1463721 chr12:40542894 SLC2A13 [+43003bp] C - 13 T vs. C 0.175 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs10878170 chr12:40552893 LRRK2 [-37653bp] C - 13 T vs. C 0.158 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs1966788 chr12:40779716 MUC19 [-7481bp] C - 11 T vs. C 0.3 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs10784576 chr12:40780164 MUC19 [-7033bp] C - 11 T vs. C 0.308 (C) - <1 (-) 0 (-) >0.05
rs117413331 chr12:40768435 LRRK2 [+5348bp] C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs7303525 chr12:40744775 LRRK2 C - 13 A vs. C 0.158 (C) 0.233 (C) <1 (-) 48 (-) >0.05
rs77627926 chr12:40582532 LRRK2 [-8014bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs6581723 chr12:40804386 MUC19 C - 13 A vs. G 0.075 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs2708441 chr12:40625167 LRRK2 C - 13 A vs. C 0.075 (A) - <1 (-) 0 (-) >0.05
rs3952596 chr12:40783055 MUC19 [-4142bp] C - 13 C vs. G 0.392 (C) 0.325 (C) <1 (-) 26 (-) >0.05
rs7311501 chr12:40779968 MUC19 [-7229bp] C - 13 A vs. G 0.167 (G) 0.25 (G) >1 (-) 55 (-) >0.05
rs11176375 chr12:40778691 MUC19 [-8506bp] C - 11 T vs. G 0.3 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs142726158 chr12:40747028 LRRK2 C - 13 T vs. C - - >1 (-) 16 (-) >0.05
rs11176165 chr12:40748664 LRRK2 C - 13 A vs. C 0.267 (C) - >1 (-) 39 (-) >0.05
rs138517721 chr12:40561441 LRRK2 [-29105bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs17443854 chr12:40703878 LRRK2 C - 13 T vs. C 0.05 (T) - >1 (-) 0 (-) >0.05
rs7303059 chr12:40778086 MUC19 [-9111bp] C - 13 A vs. T - - >1 (-) 55 (-) >0.05
rs2131082 chr12:40555609 LRRK2 [-34937bp] C - 13 C vs. G 0.425 (C) 0.325 (G) <1 (-) 0 (-) >0.05
rs2708470 chr12:40555632 LRRK2 [-34914bp] C - 13 A vs. G 0.417 (A) 0.317 (G) <1 (-) 0 (-) >0.05
rs2404840 chr12:40803788 MUC19 C - 13 A vs. G 0.383 (A) 0.458 (G) >1 (-) 30 (-) >0.05
rs34567498 chr12:40711054 LRRK2 C - 11 T vs. G - - >1 (-) 0 (-) >0.05
rs2723264 chr12:40652520 LRRK2 C - 12 T vs. C 0.217 (T) 0.2 (T) >1 (-) 31 (-) >0.05
rs79847124 chr12:40712084 LRRK2 C - 11 A vs. G - 0.025 (G) >1 (-) 0 (-) >0.05
rs11610569 chr12:40747019 LRRK2 C - 13 T vs. C - - >1 (-) 14 (-) >0.05
rs3906866 chr12:40782903 MUC19 [-4294bp] C - 13 A vs. G 0.308 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs17444730 chr12:40806480 MUC19 C - 13 A vs. C 0.092 (C) 0.217 (C) >1 (-) 46 (-) >0.05
rs10878199 chr12:40567603 LRRK2 [-22943bp] C - 13 T vs. G 0.167 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs4768224 chr12:40661403 LRRK2 C - 13 A vs. T 0.275 (A) 0.45 (T) <1 (-) 0 (-) >0.05
rs7313276 chr12:40659649 LRRK2 C - 13 T vs. G - - >1 (-) 21 (-) >0.05
rs11175943 chr12:40695776 LRRK2 C - 13 C vs. G - - >1 (-) 37 (-) >0.05
rs11564270 chr12:40681486 LRRK2 C - 13 A vs. G 0.092 (G) - >1 (-) 18 (-) >0.05
rs142933374 chr12:40601680 LRRK2 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs2131083 chr12:40555429 LRRK2 [-35117bp] C - 13 A vs. C 0.425 (A) 0.317 (C) <1 (-) 0 (-) >0.05
rs2723269 chr12:40629787 LRRK2 C - 13 A vs. T 0.075 (T) 0.325 (T) >1 (-) 0 (-) >0.05
rs17442770 chr12:40540939 SLC2A13 [+41048bp] C - 13 A vs. G 0.183 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs117987337 chr12:40772575 LRRK2 [+9488bp] C - 8 A vs. C 0.017 (C) - <1 (-) 3 (-) >0.05
rs11175862 chr12:40679269 LRRK2 C - 13 A vs. T 0.392 (A) 0.317 (A) >1 (-) 26 (-) >0.05
rs139392077 chr12:40622872 LRRK2 C - 3 A vs. C - - >1 (-) 0 (-) >0.05
rs61915613 chr12:40747091 LRRK2 C - 11 A vs. G - - <1 (-) 2 (-) >0.05

Association studies for this region [+]