LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11564256 chr12:40798413 MUC19 All: C 108,990 15 T vs. C 0.017 (T) - 1.29 (1.17-1.43) 43 (0-69) 2.43e-07
rs17492152 chr12:40807727 MUC19 All: C 108,990 15 C vs. A - - 0.77 (0.70-0.85) 52 (13-73) 2.58e-07
rs149803864 chr12:40793663 MUC19 All: C 108,990 15 T vs. A - - 0.76 (0.68-0.84) 42 (0-69) 2.71e-07
rs139590240 chr12:40810609 MUC19 All: C 108,990 15 C vs. A - - 0.78 (0.70-0.85) 51 (12-73) 2.72e-07
rs141315343 chr12:40811848 MUC19 All: C 108,990 15 T vs. G - - 0.78 (0.70-0.85) 51 (12-73) 2.74e-07
rs143615969 chr12:40810652 MUC19 All: C 108,990 15 A vs. C - - 0.78 (0.70-0.85) 51 (12-73) 2.74e-07
rs117887879 chr12:40789658 MUC19 All: C 108,990 15 G vs. A 0.017 (G) - 1.30 (1.17-1.43) 43 (0-69) 2.75e-07
rs144495455 chr12:40810453 MUC19 All: C 108,990 15 A vs. C - - 0.78 (0.70-0.85) 51 (12-73) 2.75e-07
rs147196025 chr12:40810822 MUC19 All: C 108,990 15 A vs. G - - 0.78 (0.70-0.85) 51 (12-73) 2.75e-07
rs12424424 chr12:40807129 MUC19 All: C 108,990 15 G vs. A - - 0.78 (0.70-0.85) 51 (12-73) 2.76e-07
rs142268259 chr12:40809983 MUC19 All: C 108,990 15 C vs. A - - 0.78 (0.70-0.85) 51 (12-73) 2.76e-07
rs17467039 chr12:40797038 MUC19 All: C 108,990 15 C vs. T 0.017 (C) - 1.29 (1.17-1.42) 43 (0-69) 2.76e-07
rs17467109 chr12:40806710 MUC19 All: C 108,990 15 A vs. C - - 0.78 (0.70-0.85) 51 (12-73) 2.76e-07
rs11564253 chr12:40809750 MUC19 All: C 108,990 15 A vs. G - 0.017 (G) 0.78 (0.70-0.85) 51 (12-73) 2.77e-07
rs17467116 chr12:40806737 MUC19 All: C 108,990 15 C vs. T - 0.017 (T) 0.78 (0.70-0.85) 51 (12-73) 2.77e-07
rs7487333 chr12:40812148 MUC19 All: C 108,990 15 C vs. T - - 0.78 (0.70-0.85) 51 (12-73) 2.77e-07
rs117144345 chr12:40789216 MUC19 All: C 108,990 15 T vs. G 0.017 (T) - 1.29 (1.17-1.42) 43 (0-69) 2.78e-07
rs75697282 chr12:40806957 MUC19 All: C 108,990 15 A vs. G - - 0.78 (0.70-0.85) 51 (12-73) 2.79e-07
rs5015148 chr12:40812419 MUC19 All: C 108,990 15 T vs. G - - 0.78 (0.70-0.85) 51 (12-73) 2.80e-07
rs148180074 chr12:40812638 MUC19 All: C 108,990 15 A vs. G - - 0.78 (0.70-0.85) 51 (12-73) 2.81e-07
rs150306906 chr12:40812751 MUC19 All: C 108,990 15 A vs. G - - 0.78 (0.70-0.85) 51 (12-73) 2.82e-07
rs137980689 chr12:40812838 MUC19 All: C 108,990 15 A vs. G - - 0.78 (0.70-0.85) 51 (12-73) 2.84e-07
rs77719105 chr12:40793460 MUC19 All: C 108,990 15 A vs. G 0.017 (A) 0.017 (A) 1.29 (1.17-1.42) 43 (0-69) 2.84e-07
rs118122990 chr12:40812873 MUC19 All: C 108,990 15 C vs. T - 0.008 (T) 0.78 (0.70-0.85) 51 (12-73) 2.87e-07
rs3899332 chr12:40794452 MUC19 All: C 108,990 15 C vs. T 0.017 (C) - 1.29 (1.17-1.42) 43 (0-69) 2.88e-07
rs78300565 chr12:40793515 MUC19 All: C 108,990 15 A vs. G 0.017 (A) - 1.29 (1.17-1.42) 43 (0-69) 2.89e-07
rs117929583 chr12:40791407 MUC19 All: C 108,990 15 A vs. G 0.017 (A) - 1.29 (1.17-1.42) 43 (0-69) 2.90e-07
rs4768248 chr12:40796286 MUC19 All: C 108,990 15 G vs. A 0.017 (G) 0.008 (G) 1.29 (1.17-1.42) 43 (0-69) 2.91e-07
rs17467081 chr12:40804533 MUC19 All: C 108,990 15 C vs. T - 0.017 (T) 0.77 (0.70-0.85) 50 (10-73) 3.02e-07
rs17444688 chr12:40804093 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.70-0.86) 51 (11-73) 3.23e-07
rs73094961 chr12:40788598 MUC19 All: C 108,990 15 T vs. C 0.025 (T) - 1.28 (1.17-1.41) 46 (1-70) 3.25e-07
rs146427470 chr12:40804495 MUC19 All: C 108,990 15 T vs. G - - 0.78 (0.71-0.86) 51 (11-73) 3.26e-07
rs17444702 chr12:40805677 MUC19 All: C 108,990 15 C vs. T - 0.025 (T) 0.78 (0.70-0.86) 51 (11-73) 3.30e-07
rs117867889 chr12:40805329 MUC19 All: C 108,990 15 G vs. A - 0.017 (A) 0.74 (0.67-0.83) 47 (4-71) 3.32e-07
rs1365762 chr12:40789962 MUC19 All: C 108,990 15 T vs. C 0.017 (T) 0.017 (T) 1.30 (1.17-1.43) 44 (0-69) 3.40e-07
rs17444765 chr12:40810962 MUC19 All: C 108,990 15 G vs. A - - 0.77 (0.70-0.85) 52 (13-73) 3.43e-07
rs12426903 chr12:40801530 MUC19 All: C 108,990 15 C vs. T - 0.017 (T) 0.78 (0.71-0.86) 51 (11-73) 3.45e-07
rs12422527 chr12:40768905 LRRK2 [+5818bp] All: C 108,990 15 T vs. C - - 0.72 (0.63-0.82) 29 (0-62) 3.78e-07
rs117033661 chr12:40797862 MUC19 All: C 108,990 15 T vs. G 0.008 (T) - 1.30 (1.17-1.44) 34 (0-64) 3.92e-07
rs1388592 chr12:40545952 LRRK2 [-44594bp] All: C 108,990 15 G vs. A 0.067 (G) 0.125 (G) 0.85 (0.80-0.91) 0 (0-16) 4.08e-07
rs9652020 chr12:40547379 LRRK2 [-43167bp] All: C 108,990 15 A vs. G 0.067 (A) 0.125 (A) 0.85 (0.80-0.91) 0 (0-6) 4.37e-07
rs971615 chr12:40792703 MUC19 All: C 108,990 15 T vs. C 0.008 (T) - 1.30 (1.17-1.43) 34 (0-64) 4.39e-07
rs148124094 chr12:40809053 MUC19 All: C 108,990 15 C vs. T - - 0.77 (0.70-0.86) 52 (14-74) 5.05e-07
rs12424494 chr12:40777658 MUC19 [-9539bp] All: C 108,990 15 A vs. G 0.017 (A) 0.017 (A) 1.29 (1.17-1.42) 39 (0-67) 5.29e-07
rs17465912 chr12:40656395 LRRK2 All: C 108,990 15 T vs. C 0.167 (T) 0.008 (T) 1.12 (1.07-1.16) 1 (0-54) 5.31e-07
rs4768252 chr12:40808672 MUC19 All: C 108,990 15 C vs. T - 0.008 (T) 0.77 (0.70-0.86) 55 (19-75) 5.43e-07
rs1907633 chr12:40650351 LRRK2 All: C 108,990 15 T vs. C 0.167 (T) - 1.11 (1.07-1.16) 3 (0-55) 6.55e-07
rs147045449 chr12:40798266 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.71-0.86) 50 (9-72) 6.57e-07
rs149344784 chr12:40798196 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.71-0.86) 50 (9-72) 6.61e-07
rs1907632 chr12:40650502 LRRK2 All: C 108,990 15 A vs. G 0.167 (A) - 1.11 (1.07-1.16) 3 (0-55) 6.63e-07

Association studies for this region [+]