GAK, chr4:843064-926161 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34311866 chr4:951947 TMEM175 All: C 120,238 21 C vs. T 0.15 (C) 0.075 (C) 1.26 (1.22-1.31) 52 (21-71) 6.00e-41
Meta_image?name=rs34311866

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs28669103 chr4:825719 CPLX1 [+5733bp] C - 13 T vs. C 0.175 (T) 0.042 (T) <1 (-) 0 (-) <0.05
rs4690198 chr4:927973 TMEM175 C - 13 C vs. G 0.392 (G) 0.458 (G) >1 (-) 0 (-) <0.05
rs4690199 chr4:912997 GAK C - 3 A vs. G - - >1 (-) 75 (-) <0.05
rs935965 chr4:928684 TMEM175 C - 12 T vs. C 0.333 (T) 0.283 (T) <1 (-) 0 (-) <0.05
rs62295465 chr4:833585 GAK [-9479bp] C - 12 A vs. T 0.058 (T) - <1 (-) 0 (-) <0.05
rs62295468 chr4:840765 GAK [-2299bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs4690329 chr4:931385 TMEM175 C - 12 A vs. T 0.333 (T) 0.283 (T) >1 (-) 0 (-) <0.05
rs77186370 chr4:933837 TMEM175 All: C 101,324 12 C vs. A - - 0.76 (0.62-0.93) 0 (0-10) 0.006
rs6826191 chr4:897664 GAK C - 13 A vs. G 0.267 (G) 0.1 (G) >1 (-) 0 (-) <0.05
rs11735356 chr4:849651 GAK C - 4 A vs. G - - >1 (-) 14 (-) <0.05
rs6829987 chr4:932974 TMEM175 C - 12 C vs. G 0.333 (C) 0.283 (C) <1 (-) 0 (-) <0.05
rs4690328 chr4:931649 TMEM175 C - 12 T vs. C 0.35 (T) 0.283 (T) <1 (-) 0 (-) <0.05
rs6847650 chr4:917698 GAK C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs147786984 chr4:808184 CPLX1 C - 12 A vs. G - - >1 (-) 35 (-) <0.05
rs114759489 chr4:903602 GAK C - 7 T vs. C - - >1 (-) 0 (-) <0.05
rs200412978 chr4:897393 GAK C - 7 A vs. G - - <1 (-) 42 (-) <0.05
rs139084910 chr4:850564 GAK C - 4 A vs. G - - <1 (-) 0 (-) <0.05
rs56253935 chr4:853871 GAK C - 13 A vs. T 0.158 (T) 0.283 (T) <1 (-) 14 (-) <0.05
rs6822424 chr4:919765 GAK C - 13 A vs. C 0.392 (A) 0.417 (A) <1 (-) 0 (-) <0.05
rs62295470 chr4:841533 GAK [-1531bp] C - 12 T vs. C 0.058 (C) 0.058 (C) <1 (-) 0 (-) <0.05
rs62295461 chr4:820995 CPLX1 [+1009bp] C - 13 C vs. G 0.15 (G) - <1 (-) 0 (-) <0.05
rs10005752 chr4:902204 GAK C - 13 A vs. G 0.408 (G) 0.433 (G) >1 (-) 10 (-) <0.05
rs3755959 chr4:901672 GAK C - 13 T vs. C 0.408 (C) 0.433 (C) >1 (-) 10 (-) <0.05
rs3796610 chr4:903694 GAK C - 13 T vs. C 0.408 (C) 0.433 (C) >1 (-) 9 (-) <0.05
rs3775112 chr4:901460 GAK C - 13 T vs. C 0.408 (C) 0.433 (C) >1 (-) 9 (-) <0.05
rs6842215 chr4:919750 GAK C - 13 C vs. G 0.383 (G) 0.417 (G) >1 (-) 0 (-) <0.05
rs75337397 chr4:839522 GAK [-3542bp] C - 12 A vs. G 0.05 (A) 0.05 (A) >1 (-) 0 (-) <0.05
rs4690330 chr4:922349 GAK C - 13 A vs. G 0.375 (G) 0.442 (G) >1 (-) 0 (-) <0.05
rs13118494 chr4:914354 GAK C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs11723135 chr4:918224 GAK C - 13 A vs. T 0.383 (T) 0.417 (T) >1 (-) 0 (-) <0.05
rs6856659 chr4:914851 GAK C - 13 A vs. G 0.383 (G) 0.408 (G) >1 (-) 0 (-) <0.05
rs6826965 chr4:914688 GAK C - 13 T vs. C 0.383 (C) 0.408 (C) >1 (-) 0 (-) <0.05
rs55784607 chr4:830009 CPLX1 [+10023bp] C - 13 T vs. C 0.133 (T) 0.217 (T) >1 (-) 0 (-) <0.05
rs56845396 chr4:815952 CPLX1 C - 13 A vs. G 0.142 (A) 0.367 (A) >1 (-) 0 (-) <0.05
rs17165026 chr4:798511 CPLX1 C - 12 T vs. C 0.042 (T) 0.158 (T) >1 (-) 11 (-) <0.05
rs56157509 chr4:830002 CPLX1 [+10016bp] C - 13 T vs. G 0.125 (G) 0.217 (G) <1 (-) 0 (-) <0.05
rs62295467 chr4:836831 GAK [-6233bp] C - 12 A vs. G 0.058 (A) - >1 (-) 0 (-) <0.05
rs3937759 chr4:827083 CPLX1 [+7097bp] C - 13 T vs. C 0.158 (T) 0.2 (T) >1 (-) 0 (-) <0.05
rs3822022 chr4:897403 GAK C - 12 A vs. G 0.25 (G) 0.142 (G) >1 (-) 0 (-) <0.05
rs7660746 chr4:810151 CPLX1 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs1078138 chr4:828824 CPLX1 [+8838bp] C - 13 T vs. C 0.158 (T) 0.192 (T) >1 (-) 0 (-) <0.05
rs115657987 chr4:952954 DGKQ C - 10 A vs. G 0.017 (A) - <1 (-) 0 (-) <0.05
rs73207774 chr4:828102 CPLX1 [+8116bp] C - 3 T vs. C - - >1 (-) 0 (-) <0.05
rs28504502 chr4:803637 CPLX1 C - 13 T vs. C 0.033 (T) 0.017 (T) >1 (-) 0 (-) <0.05
rs2008478 chr4:899265 GAK C - 13 T vs. C - 0.325 (C) <1 (-) 0 (-) <0.05
rs7663192 chr4:923947 GAK C - 12 T vs. C 0.333 (T) 0.275 (T) <1 (-) 19 (-) <0.05
rs2290405 chr4:946974 TMEM175 C - 12 A vs. G 0.458 (G) 0.417 (A) <1 (-) 0 (-) <0.05
rs7665653 chr4:912473 GAK C - 13 A vs. C 0.408 (A) 0.417 (A) <1 (-) 0 (-) <0.05
rs11552301 chr4:946226 TMEM175 C - 13 T vs. C 0.475 (T) 0.425 (T) >1 (-) 0 (-) <0.05
rs7687129 chr4:939883 TMEM175 C - 12 T vs. C 0.333 (T) 0.317 (T) <1 (-) 0 (-) <0.05

Association studies for this region [+]