SNCA, chr4:90645250-90759466 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs356182 chr4:90626111 SNCA [-19139bp] All: C 120,238 21 G vs. A 0.417 (G) 0.375 (A) 1.34 (1.30-1.38) 50 (17-70) 1.85e-82
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3822088 chr4:90703993 SNCA C - 13 A vs. C 0.017 (A) 0.35 (A) >1 (-) 12 (-) <0.05
rs146289333 chr4:90650946 SNCA C - 7 A vs. C - - <1 (-) 53 (-) <0.05
rs10516842 chr4:90606180 SNCA [-39070bp] C - 13 A vs. G 0.008 (G) 0.05 (G) >1 (-) 14 (-) <0.05
rs3775437 chr4:90705943 SNCA C - 12 A vs. G 0.017 (A) 0.342 (A) >1 (-) 0 (-) <0.05
rs2351861 chr4:90597049 SNCA [-48201bp] C - 13 C vs. G - - <1 (-) 49 (-) <0.05
rs112180327 chr4:90616430 SNCA [-28820bp] C - 7 A vs. T 0.008 (T) - >1 (-) 47 (-) <0.05
rs7654047 chr4:90617291 SNCA [-27959bp] C - 13 A vs. G 0.033 (G) - >1 (-) 39 (-) <0.05
rs114088559 chr4:90610327 SNCA [-34923bp] C - 4 T vs. C 0.033 (T) - >1 (-) 0 (-) <0.05
rs3775438 chr4:90707903 SNCA C - 12 T vs. C 0.008 (T) 0.333 (T) >1 (-) 28 (-) <0.05
rs143072429 chr4:90772986 SNCA [+13520bp] C - 10 A vs. G - - >1 (-) 2 (-) <0.05
rs7668349 chr4:90613879 SNCA [-31371bp] C - 13 A vs. T 0.033 (T) - >1 (-) 36 (-) <0.05
rs7674853 chr4:90614583 SNCA [-30667bp] C - 13 A vs. G 0.033 (A) - <1 (-) 36 (-) <0.05
rs3898322 chr4:90709490 SNCA C - 12 T vs. C 0.017 (C) 0.342 (C) <1 (-) 0 (-) <0.05
rs17016018 chr4:90614899 SNCA [-30351bp] C - 13 T vs. G 0.033 (G) - >1 (-) 36 (-) <0.05
rs3822091 chr4:90710038 SNCA C - 12 A vs. G 0.017 (A) 0.342 (A) >1 (-) 0 (-) <0.05
rs62306323 chr4:90718995 SNCA C - 13 T vs. C 0.142 (T) - <1 (-) 0 (-) <0.05
rs3775435 chr4:90703029 SNCA C - 13 A vs. G - 0.342 (G) <1 (-) 0 (-) <0.05
rs3729594 chr4:90704903 SNCA C - 13 A vs. G 0.017 (G) 0.342 (G) <1 (-) 0 (-) <0.05
rs3796662 chr4:90704555 SNCA C - 13 A vs. G - 0.283 (G) >1 (-) 0 (-) <0.05
rs6858263 chr4:90624094 SNCA [-21156bp] C - 13 T vs. C 0.033 (T) - <1 (-) 36 (-) <0.05
rs10516843 chr4:90615188 SNCA [-30062bp] C - 13 C vs. G 0.033 (G) - >1 (-) 35 (-) <0.05
rs10516847 chr4:90716442 SNCA C - 12 C vs. G - 0.342 (C) >1 (-) 4 (-) <0.05
rs60341854 chr4:90769636 SNCA [+10170bp] C - 12 A vs. G - 0.275 (A) >1 (-) 0 (-) <0.05
rs12643790 chr4:90774148 SNCA [+14682bp] C - 12 C vs. G 0.017 (G) 0.283 (G) <1 (-) 0 (-) <0.05
rs9996301 chr4:90606636 SNCA [-38614bp] C - 6 T vs. C 0.05 (C) - >1 (-) 29 (-) <0.05
rs3775453 chr4:90736122 SNCA C - 12 A vs. C - 0.342 (A) >1 (-) 23 (-) <0.05
rs34683772 chr4:90725536 SNCA C - 12 T vs. C 0.025 (C) 0.35 (C) <1 (-) 0 (-) <0.05
rs35540244 chr4:90725538 SNCA C - 12 T vs. G 0.025 (G) 0.342 (G) <1 (-) 0 (-) <0.05
rs3775444 chr4:90726536 SNCA C - 12 T vs. C 0.025 (T) 0.3 (T) >1 (-) 0 (-) <0.05
rs17016196 chr4:90727315 SNCA C - 12 T vs. C 0.017 (C) 0.342 (C) <1 (-) 0 (-) <0.05
rs961386 chr4:90732803 SNCA C - 12 A vs. T 0.017 (T) 0.342 (T) <1 (-) 0 (-) <0.05
rs2870027 chr4:90757312 SNCA C - 12 T vs. C - 0.333 (T) >1 (-) 24 (-) <0.05
rs3775450 chr4:90734914 SNCA C - 12 A vs. C 0.017 (A) 0.342 (A) >1 (-) 0 (-) <0.05
rs77924317 chr4:90794603 MMRN1 [-6080bp] C - 12 T vs. C - 0.258 (C) <1 (-) 0 (-) <0.05
rs58165695 chr4:90764324 SNCA [+4858bp] C - 12 A vs. G - 0.275 (G) <1 (-) 0 (-) <0.05
rs71609574 chr4:90627967 SNCA [-17283bp] C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs3775442 chr4:90715231 SNCA C - 13 T vs. C 0.025 (T) 0.342 (T) >1 (-) 0 (-) <0.05
rs116189530 chr4:90765029 SNCA [+5563bp] C - 11 T vs. C - - <1 (-) 0 (-) <0.05
rs9762836 chr4:90708507 SNCA C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs62306260 chr4:90597976 SNCA [-47274bp] C - 10 A vs. G 0.025 (A) - <1 (-) 52 (-) <0.05
rs35029783 chr4:90705511 SNCA C - 10 T vs. C - - <1 (-) 14 (-) <0.05
rs77622899 chr4:90669623 SNCA C - 10 T vs. C - - >1 (-) 27 (-) <0.05
rs58108801 chr4:90765412 SNCA [+5946bp] C - 7 T vs. G 0.017 (T) 0.275 (T) >1 (-) 0 (-) <0.05
rs12512806 chr4:90625813 SNCA [-19437bp] C - 10 A vs. G 0.008 (G) - >1 (-) 0 (-) <0.05
rs72657783 chr4:90785666 MMRN1 [-15017bp] C - 6 T vs. C 0.042 (T) - >1 (-) 13 (-) <0.05
rs115637786 chr4:90770591 SNCA [+11125bp] C - 12 T vs. C 0.033 (T) - >1 (-) 0 (-) <0.05
rs148354482 chr4:90786585 MMRN1 [-14098bp] C - 12 A vs. G - - >1 (-) 0 (-) <0.05
rs62306278 chr4:90628685 SNCA [-16565bp] C - 13 A vs. G 0.042 (A) - <1 (-) 50 (-) <0.05
rs115873866 chr4:90618694 SNCA [-26556bp] C - 9 A vs. G 0.008 (G) - >1 (-) 43 (-) <0.05
rs148185271 chr4:90601407 SNCA [-43843bp] C - 11 A vs. C - - >1 (-) 0 (-) <0.05

Association studies for this region [+]