SLC26A1, chr4:972861-987228 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34311866 chr4:951947 TMEM175 All: C 120,238 21 C vs. T 0.15 (C) 0.075 (C) 1.26 (1.22-1.31) 52 (21-71) 6.00e-41
Meta_image?name=rs34311866

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs41286661 chr4:957284 DGKQ All: C 105,041 14 T vs. C 0.133 (T) 0.192 (T) 1.11 (1.06-1.16) 28 (0-62) 1.60e-06
rs11731377 chr4:971266 DGKQ All: C 105,041 14 G vs. T 0.167 (G) 0.192 (G) 1.15 (1.09-1.22) 14 (0-52) 1.75e-06
rs11736451 chr4:977022 DGKQ All: C 105,041 14 G vs. A 0.167 (G) 0.2 (G) 1.15 (1.08-1.21) 28 (0-62) 1.85e-06
rs935977 chr4:943540 TMEM175 C - 12 A vs. G 0.342 (A) 0.175 (A) <1 (-) 25 (-) <1.00e-04
rs11248063 chr4:989163 IDUA C - 11 T vs. C 0.15 (C) 0.075 (C) <1 (-) 48 (-) <1.00e-04
rs11937767 chr4:988506 IDUA All: C 105,041 14 T vs. C - - 0.87 (0.82-0.92) 33 (0-64) 2.60e-06
rs10012074 chr4:1026866 FGFRL1 [+6181bp] All: C 105,041 14 G vs. A 0.192 (G) 0.142 (G) 0.88 (0.84-0.93) 0 (0-14) 3.42e-06
rs11729777 chr4:989548 IDUA C - 11 T vs. C 0.15 (C) 0.067 (C) <1 (-) 51 (-) <1.00e-04
rs62294519 chr4:988619 IDUA C - 11 T vs. C 0.142 (C) 0.042 (C) <1 (-) 50 (-) <1.00e-04
rs148959726 chr4:993388 IDUA All: C 105,041 14 G vs. A - - 1.19 (1.10-1.28) 0 (0-43) 6.83e-06
rs4690229 chr4:970724 DGKQ C - 12 A vs. T 0.417 (T) 0.308 (T) >1 (-) 6 (-) <1.00e-04
rs35654957 chr4:1010077 FGFRL1 All: C 105,041 14 C vs. T 0.358 (C) 0.125 (C) 1.08 (1.04-1.12) 37 (0-67) 9.70e-06
rs10902762 chr4:980932 SLC26A1 C - 12 A vs. G 0.392 (A) 0.217 (A) <1 (-) 11 (-) <1.00e-04
rs4690220 chr4:980464 DGKQ C - 12 A vs. G 0.392 (G) 0.308 (G) >1 (-) 14 (-) <1.00e-04
rs73211813 chr4:975238 DGKQ All: C 105,041 14 T vs. C 0.15 (T) 0.183 (T) 1.12 (1.06-1.18) 20 (0-57) 1.42e-05
rs3796621 chr4:982852 SLC26A1 C - 12 A vs. G 0.408 (A) 0.325 (A) <1 (-) 11 (-) <1.00e-04
rs4690221 chr4:983809 SLC26A1 C - 12 T vs. C 0.408 (T) 0.292 (T) <1 (-) 12 (-) <1.00e-04
rs114806891 chr4:995868 IDUA All: C 105,041 14 T vs. C 0.042 (T) - 0.86 (0.80-0.92) 0 (0-34) 2.72e-05
rs4450872 chr4:1024726 FGFRL1 [+4041bp] All: C 105,041 14 A vs. G 0.242 (A) 0.125 (A) 0.90 (0.86-0.95) 0 (0-19) 2.85e-05
rs55916145 chr4:1010778 FGFRL1 All: C 105,041 14 C vs. T 0.4 (C) 0.275 (C) 1.07 (1.04-1.11) 18 (0-55) 3.15e-05
rs2305489 chr4:997488 IDUA All: C 105,041 14 T vs. G 0.058 (T) 0.008 (T) 0.87 (0.81-0.93) 0 (0-29) 3.22e-05
rs76865393 chr4:998777 IDUA [+461bp] All: C 105,041 14 T vs. C 0.058 (T) - 0.87 (0.81-0.93) 0 (0-29) 3.24e-05
rs10461363 chr4:1000383 IDUA [+2067bp] All: C 105,041 14 T vs. G 0.058 (T) 0.008 (T) 0.87 (0.81-0.93) 0 (0-29) 3.27e-05
rs77592320 chr4:1000799 IDUA [+2483bp] All: C 105,041 14 T vs. C 0.058 (T) 0.008 (T) 0.87 (0.81-0.93) 0 (0-28) 3.29e-05
rs28668686 chr4:1028434 FGFRL1 [+7749bp] C - 12 T vs. C - 0.05 (T) >1 (-) 52 (-) <1.00e-04
rs2290401 chr4:984870 SLC26A1 C - 12 C vs. G 0.167 (C) 0.192 (C) >1 (-) 34 (-) <1.00e-04
rs6829197 chr4:971021 DGKQ C - 12 C vs. G 0.183 (C) 0.283 (C) >1 (-) 15 (-) <1.00e-04
rs78852263 chr4:1010030 FGFRL1 All: C 105,041 14 C vs. T 0.058 (C) - 0.87 (0.82-0.93) 0 (0-29) 5.05e-05
rs116709547 chr4:1009703 FGFRL1 All: C 105,041 14 T vs. G 0.058 (T) - 0.87 (0.82-0.93) 0 (0-28) 5.12e-05
rs62296067 chr4:1025457 FGFRL1 [+4772bp] All: C 105,041 14 C vs. T 0.283 (C) 0.333 (C) 0.92 (0.88-0.96) 0 (0-28) 5.17e-05
rs80257442 chr4:1033334 FGFRL1 [+12649bp] All: C 105,041 14 T vs. C 0.142 (T) 0.025 (T) 0.89 (0.85-0.94) 0 (0-19) 5.21e-05
rs72501960 chr4:1014325 FGFRL1 All: C 105,041 14 T vs. C 0.058 (T) - 0.88 (0.82-0.93) 0 (0-29) 5.89e-05
rs78590462 chr4:1015204 FGFRL1 All: C 105,041 14 T vs. C 0.058 (T) 0.033 (T) 0.88 (0.82-0.93) 0 (0-29) 5.91e-05
rs60633311 chr4:1023933 FGFRL1 [+3248bp] All: C 105,041 14 C vs. T 0.283 (C) 0.342 (C) 0.92 (0.88-0.96) 0 (0-30) 6.52e-05
rs935973 chr4:1024287 FGFRL1 [+3602bp] All: C 105,041 14 C vs. T 0.275 (C) 0.342 (C) 0.92 (0.88-0.96) 0 (0-30) 6.54e-05
rs4647932 chr4:1019011 FGFRL1 All: C 105,041 14 T vs. C 0.058 (T) - 0.88 (0.82-0.94) 0 (0-28) 7.05e-05
rs62296060 chr4:1014066 FGFRL1 All: C 105,041 14 A vs. G 0.233 (A) 0.025 (A) 1.09 (1.04-1.14) 0 (0-49) 7.43e-05
rs10471250 chr4:989713 IDUA All: C 105,041 14 C vs. T 0.2 (C) 0.208 (C) 1.12 (1.06-1.18) 2 (0-56) 8.01e-05
rs62296061 chr4:1014172 FGFRL1 All: C 105,041 14 A vs. G 0.233 (A) 0.033 (A) 1.09 (1.04-1.13) 0 (0-51) 8.18e-05
rs3796624 chr4:1015844 FGFRL1 All: C 105,041 14 G vs. C 0.233 (G) - 1.09 (1.04-1.13) 0 (0-51) 8.34e-05
rs66515989 chr4:1013918 FGFRL1 All: C 105,041 14 A vs. G 0.233 (A) - 1.09 (1.04-1.13) 0 (0-51) 8.49e-05
rs3822032 chr4:1015789 FGFRL1 All: C 105,041 14 C vs. T 0.058 (C) - 0.88 (0.82-0.94) 0 (0-32) 8.90e-05
rs56039006 chr4:954741 DGKQ C - 12 C vs. G 0.117 (G) 0.2 (G) <1 (-) 7 (-) <0.05
rs35220088 chr4:1010251 FGFRL1 C - 12 C vs. G 0.383 (C) 0.25 (C) >1 (-) 5 (-) <0.05
rs111813989 chr4:1029910 FGFRL1 [+9225bp] C - 9 A vs. G 0.083 (A) - >1 (-) 36 (-) <0.05
rs35321695 chr4:1030779 FGFRL1 [+10094bp] C - 13 T vs. C 0.158 (T) 0.075 (T) >1 (-) 23 (-) <0.05
rs28696013 chr4:1030374 FGFRL1 [+9689bp] C - 13 A vs. T 0.142 (A) 0.042 (A) >1 (-) 12 (-) <0.05
rs935974 chr4:1024352 FGFRL1 [+3667bp] C - 13 A vs. T 0.133 (A) 0.042 (A) >1 (-) 20 (-) <0.05
rs34587452 chr4:1009900 FGFRL1 C - 12 C vs. G 0.233 (C) - >1 (-) 0 (-) <0.05
rs11734750 chr4:1006924 FGFRL1 C - 12 T vs. C 0.225 (T) - >1 (-) 0 (-) <0.05

Association studies for this region [+]