SCARB2, chr4:77079890-77135046 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56277851 chr4:77146872 FAM47E All: C 108,990 15 G vs. A 0.2 (G) 0.15 (A) 1.12 (1.08-1.17) 0 (0-22) 1.24e-09
Meta_image?name=rs56277851

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7697073 chr4:77132634 SCARB2 All: C 108,990 15 T vs. C 0.333 (T) 0.367 (C) 1.08 (1.04-1.12) 0 (0-52) 9.47e-06
rs13149410 chr4:77174072 FAM47E C - 13 T vs. C 0.042 (C) - <1 (-) 0 (-) <1.00e-04
rs113464411 chr4:77085131 SCARB2 All: C 108,990 15 T vs. C - - 1.33 (1.17-1.52) 0 (0-45) 1.57e-05
rs4859648 chr4:77174662 FAM47E All: C 108,990 15 G vs. A 0.075 (G) 0.458 (G) 1.13 (1.07-1.19) 0 (0-53) 1.62e-05
rs34385906 chr4:77154193 FAM47E All: C 108,990 15 T vs. C 0.092 (T) - 1.11 (1.06-1.17) 0 (0-42) 1.74e-05
rs35472515 chr4:77154196 FAM47E All: C 108,990 15 G vs. A 0.092 (G) - 1.11 (1.06-1.17) 0 (0-42) 1.74e-05
rs4530661 chr4:77149335 FAM47E C - 13 A vs. C 0.242 (A) 0.142 (C) >1 (-) 0 (-) <1.00e-04
rs35507310 chr4:77154709 FAM47E All: C 108,990 15 G vs. T - - 0.90 (0.85-0.94) 0 (0-50) 2.33e-05
rs6858014 chr4:77085729 SCARB2 All: C 108,990 15 C vs. A - - 0.92 (0.89-0.96) 23 (0-58) 2.58e-05
rs11938626 chr4:77104152 SCARB2 All: C 108,990 15 C vs. T 0.208 (C) 0.342 (T) 1.09 (1.05-1.13) 19 (0-56) 3.14e-05
rs11946079 chr4:77105700 SCARB2 All: C 108,990 15 G vs. T 0.217 (G) 0.342 (T) 1.08 (1.04-1.12) 19 (0-56) 3.56e-05
rs4859435 chr4:77152816 FAM47E C - 13 T vs. C 0.242 (T) 0.142 (C) >1 (-) 0 (-) <1.00e-04
rs2174921 chr4:77148055 FAM47E C - 13 C vs. G 0.242 (G) 0.142 (C) <1 (-) 0 (-) <1.00e-04
rs1465922 chr4:77134870 SCARB2 All: C 108,990 15 G vs. A 0.367 (G) 0.333 (A) 1.07 (1.04-1.11) 0 (0-49) 3.99e-05
rs35873788 chr4:77096606 SCARB2 All: C 108,990 15 T vs. G 0.217 (T) 0.392 (G) 1.08 (1.04-1.12) 17 (0-54) 4.09e-05
rs4859432 chr4:77152547 FAM47E All: C 106,227 14 T vs. C 0.108 (T) 0.483 (T) 1.10 (1.05-1.16) 0 (0-44) 4.39e-05
rs1372409 chr4:77099661 SCARB2 All: C 108,990 15 C vs. A 0.2 (C) 0.35 (A) 1.08 (1.04-1.12) 18 (0-55) 4.42e-05
rs4859429 chr4:77108306 SCARB2 All: C 108,990 15 T vs. C 0.208 (T) 0.317 (C) 1.08 (1.04-1.12) 21 (0-57) 4.61e-05
rs79393144 chr4:77183931 FAM47E All: C 108,990 15 C vs. T 0.075 (C) 0.342 (C) 1.13 (1.07-1.21) 39 (0-67) 4.63e-05
rs1470194 chr4:77101378 SCARB2 All: C 108,990 15 C vs. A 0.092 (C) 0.25 (C) 1.15 (1.08-1.23) 12 (0-50) 4.77e-05
rs36031249 chr4:77154771 FAM47E All: C 108,990 15 G vs. A 0.083 (G) 0.45 (G) 1.12 (1.06-1.18) 0 (0-46) 4.77e-05
rs12498327 chr4:77133079 SCARB2 All: C 108,990 15 C vs. A 0.35 (C) 0.333 (A) 1.07 (1.04-1.11) 0 (0-49) 4.84e-05
rs2869851 chr4:77094831 SCARB2 All: C 108,990 15 G vs. T 0.217 (G) 0.383 (T) 1.08 (1.04-1.12) 19 (0-56) 4.96e-05
rs78586815 chr4:77168444 FAM47E All: C 108,990 15 A vs. G 0.075 (A) 0.467 (A) 1.11 (1.06-1.17) 0 (0-51) 5.85e-05
rs4859625 chr4:77104529 SCARB2 All: C 108,990 15 C vs. T 0.092 (C) 0.25 (C) 1.15 (1.07-1.23) 9 (0-46) 6.21e-05
rs7675963 chr4:77142050 FAM47E C - 13 C vs. G 0.375 (C) - >1 (-) 0 (-) <1.00e-04
rs59473442 chr4:77140297 FAM47E C - 13 A vs. T 0.375 (A) - >1 (-) 0 (-) <1.00e-04
rs12643198 chr4:77163426 FAM47E All: C 108,990 15 A vs. G 0.075 (A) 0.467 (A) 1.11 (1.06-1.17) 0 (0-50) 6.70e-05
rs55889442 chr4:77136827 FAM47E C - 13 C vs. G 0.375 (C) - >1 (-) 0 (-) <1.00e-04
rs62303000 chr4:77137580 FAM47E C - 13 A vs. T 0.375 (T) - <1 (-) 0 (-) <1.00e-04
rs7664889 chr4:77087704 SCARB2 All: C 108,990 15 T vs. G 0.092 (T) 0.283 (T) 1.14 (1.07-1.21) 20 (0-56) 7.78e-05
rs111332382 chr4:77128389 SCARB2 All: C 103,470 14 T vs. C - - 1.43 (1.20-1.70) 0 (0-35) 8.01e-05
rs7437856 chr4:77076710 SCARB2 [-3180bp] All: C 108,990 15 A vs. G 0.225 (A) 0.358 (G) 1.08 (1.04-1.12) 13 (0-51) 8.19e-05
rs1550556 chr4:77094541 SCARB2 All: C 108,990 15 T vs. C 0.092 (T) 0.283 (T) 1.14 (1.07-1.21) 18 (0-55) 9.10e-05
rs4859639 chr4:77153136 FAM47E All: C 108,990 15 T vs. C 0.108 (T) 0.475 (T) 1.11 (1.05-1.17) 0 (0-44) 9.83e-05
rs13119254 chr4:77095143 SCARB2 All: C 106,227 14 G vs. A 0.092 (G) 0.233 (G) 1.14 (1.07-1.22) 21 (0-58) 1.28e-04
rs36035650 chr4:77083350 SCARB2 All: C 108,990 15 A vs. G 0.092 (A) 0.25 (A) 1.13 (1.06-1.21) 18 (0-55) 1.44e-04
rs1441923 chr4:77103529 SCARB2 All: C 108,990 15 C vs. T 0.083 (C) 0.25 (C) 1.13 (1.06-1.21) 20 (0-56) 1.65e-04
rs13117238 chr4:77173914 FAM47E All: C 108,990 15 A vs. C 0.133 (A) 0.467 (A) 1.09 (1.04-1.13) 0 (0-48) 1.95e-04
rs1348207 chr4:77167499 FAM47E C - 13 A vs. T 0.333 (A) 0.05 (T) >1 (-) 0 (-) <0.05
rs74889910 chr4:77183646 FAM47E All: C 108,990 15 G vs. A 0.075 (G) 0.383 (G) 1.11 (1.05-1.17) 31 (0-63) 3.36e-04
rs1596115 chr4:77151432 FAM47E C - 13 C vs. G 0.108 (G) 0.475 (G) <1 (-) 0 (-) <0.05
rs13136819 chr4:77151715 FAM47E C - 13 C vs. G 0.108 (G) 0.475 (G) <1 (-) 0 (-) <0.05
rs4859437 chr4:77174095 FAM47E C - 13 A vs. T 0.075 (A) 0.467 (A) >1 (-) 5 (-) <0.05
rs4859431 chr4:77152539 FAM47E C - 13 C vs. G 0.108 (C) 0.483 (C) >1 (-) 0 (-) <0.05
rs71607345 chr4:77156297 FAM47E C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs13111888 chr4:77131294 SCARB2 C - 13 A vs. G 0.158 (A) 0.25 (A) >1 (-) 0 (-) <0.05
rs56896076 chr4:77161632 FAM47E C - 13 C vs. G 0.075 (G) 0.467 (G) <1 (-) 0 (-) <0.05
rs72858533 chr4:77155742 FAM47E C - 13 C vs. G 0.058 (G) 0.017 (G) >1 (-) 0 (-) <0.05
rs73828720 chr4:77155728 FAM47E C - 13 C vs. G 0.067 (G) 0.033 (G) >1 (-) 0 (-) <0.05

Association studies for this region [+]