SCARB2, chr4:77079890-77135046 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56277851 chr4:77146872 FAM47E All: C 108,990 15 G vs. A 0.2 (G) 0.15 (A) 1.12 (1.08-1.17) 0 (0-22) 1.24e-09
Meta_image?name=rs56277851

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs56277851 chr4:77146872 FAM47E All: C 108,990 15 G vs. A 0.2 (G) 0.15 (A) 1.12 (1.08-1.17) 0 (0-22) 1.24e-09
rs7655536 chr4:77176768 FAM47E All: C 108,990 15 C vs. T 0.15 (C) 0.2 (T) 1.13 (1.09-1.17) 35 (0-65) 1.31e-09
rs2119730 chr4:77146405 FAM47E All: C 108,990 15 T vs. C 0.175 (T) 0.15 (C) 1.12 (1.08-1.16) 0 (0-15) 1.57e-09
rs56275416 chr4:77146751 FAM47E All: C 108,990 15 C vs. G 0.183 (C) 0.15 (G) 1.12 (1.08-1.16) 0 (0-15) 1.57e-09
rs4101061 chr4:77147969 FAM47E All: C 108,990 15 G vs. A 0.242 (G) 0.142 (A) 1.11 (1.07-1.15) 0 (-) 1.66e-09
rs1441904 chr4:77151880 FAM47E All: C 108,990 15 G vs. A 0.242 (G) 0.142 (A) 1.11 (1.07-1.15) 0 (-) 2.19e-09
rs10032423 chr4:77140733 FAM47E All: C 108,990 15 T vs. C 0.375 (T) 0.042 (C) 1.09 (1.05-1.12) 0 (0-46) 2.03e-07
rs7685696 chr4:77139510 FAM47E All: C 108,990 15 G vs. A 0.375 (G) 0.042 (A) 1.09 (1.05-1.12) 0 (0-47) 2.78e-07
rs9991301 chr4:77142235 FAM47E All: C 108,990 15 T vs. C 0.367 (T) 0.05 (C) 1.09 (1.05-1.12) 0 (0-45) 3.12e-07
rs61216514 chr4:77163722 FAM47E All: C 108,990 15 A vs. G 0.05 (A) 0.042 (A) 0.87 (0.82-0.92) 0 (0-50) 4.91e-07
rs72655564 chr4:77169876 FAM47E All: C 108,990 15 C vs. A 0.067 (C) 0.042 (C) 0.87 (0.82-0.92) 0 (0-49) 4.94e-07
rs1866975 chr4:77138658 FAM47E All: C 108,990 15 T vs. C 0.375 (T) 0.042 (C) 1.08 (1.05-1.12) 0 (0-46) 8.62e-07
rs12643261 chr4:77176848 FAM47E All: C 102,085 14 C vs. T 0.075 (C) 0.442 (C) 1.15 (1.08-1.21) 10 (0-49) 2.07e-06
rs12651582 chr4:77176897 FAM47E All: C 108,990 15 T vs. C 0.075 (T) 0.442 (T) 1.13 (1.07-1.19) 22 (0-58) 2.31e-06
rs1588214 chr4:77150296 FAM47E All: C 108,990 15 C vs. T 0.108 (C) 0.475 (C) 1.12 (1.07-1.17) 0 (0-48) 2.60e-06
rs6825004 chr4:77110365 SCARB2 All: C 108,990 15 G vs. C 0.25 (G) 0.325 (G) 0.92 (0.89-0.95) 42 (0-69) 2.64e-06
rs11531413 chr4:77148184 FAM47E All: C 108,990 15 T vs. C 0.108 (T) 0.475 (T) 1.12 (1.07-1.17) 0 (0-45) 2.66e-06
rs56153157 chr4:77141118 FAM47E All: C 108,990 15 G vs. A 0.375 (G) - 1.08 (1.05-1.11) 0 (0-39) 2.91e-06
rs13150767 chr4:77147073 FAM47E All: C 108,990 15 A vs. G 0.108 (A) 0.483 (A) 1.12 (1.07-1.17) 0 (0-46) 3.00e-06
rs10004443 chr4:77147513 FAM47E All: C 108,990 15 A vs. G 0.108 (A) 0.467 (A) 1.12 (1.07-1.17) 0 (0-46) 3.04e-06
rs1441903 chr4:77149742 FAM47E All: C 108,990 15 C vs. A 0.108 (C) 0.475 (C) 1.12 (1.07-1.17) 0 (0-48) 3.08e-06
rs4859430 chr4:77149099 FAM47E All: C 108,990 15 A vs. G 0.108 (A) 0.467 (A) 1.12 (1.07-1.17) 0 (0-47) 3.17e-06
rs13114306 chr4:77148495 FAM47E All: C 108,990 15 T vs. C 0.108 (T) 0.475 (T) 1.12 (1.07-1.17) 0 (0-47) 3.18e-06
rs60225905 chr4:77150190 FAM47E All: C 108,990 15 G vs. A 0.108 (G) 0.475 (G) 1.11 (1.07-1.17) 0 (0-48) 3.18e-06
rs78908613 chr4:77150215 FAM47E All: C 108,990 15 G vs. A - 0.475 (A) 0.90 (0.86-0.94) 0 (0-48) 3.18e-06
rs1828138 chr4:77150478 FAM47E All: C 108,990 15 C vs. T 0.108 (C) 0.458 (C) 1.11 (1.07-1.17) 0 (0-48) 3.22e-06
rs34846125 chr4:77151017 FAM47E All: C 108,990 15 C vs. A 0.108 (C) 0.475 (C) 1.11 (1.06-1.17) 0 (0-48) 3.35e-06
rs13137733 chr4:77182273 FAM47E All: C 108,990 15 T vs. C 0.067 (T) 0.442 (T) 1.13 (1.07-1.19) 8 (0-45) 3.36e-06
rs36121867 chr4:77154421 FAM47E All: C 108,990 15 T vs. C 0.108 (T) 0.467 (T) 1.11 (1.06-1.17) 0 (0-49) 3.36e-06
rs1583943 chr4:77153919 FAM47E All: C 108,990 15 G vs. A 0.108 (G) 0.475 (G) 1.11 (1.06-1.17) 0 (0-49) 3.47e-06
rs1596116 chr4:77151474 FAM47E All: C 108,990 15 T vs. C 0.108 (T) 0.467 (T) 1.11 (1.06-1.17) 0 (0-49) 3.51e-06
rs4859641 chr4:77153420 FAM47E All: C 108,990 15 G vs. A 0.108 (G) 0.475 (G) 1.11 (1.06-1.17) 0 (0-49) 3.53e-06
rs4859436 chr4:77152867 FAM47E All: C 108,990 15 T vs. C 0.108 (T) 0.475 (T) 1.11 (1.06-1.17) 0 (0-49) 3.58e-06
rs4321663 chr4:77152052 FAM47E All: C 108,990 15 G vs. A 0.108 (G) 0.467 (G) 1.11 (1.06-1.17) 0 (0-48) 3.83e-06
rs34638846 chr4:77182409 FAM47E All: C 108,990 15 G vs. A 0.067 (G) 0.442 (G) 1.13 (1.07-1.19) 8 (0-45) 4.07e-06
rs2869863 chr4:77181755 FAM47E All: C 108,990 15 G vs. A 0.075 (G) 0.442 (G) 1.13 (1.07-1.19) 9 (0-47) 4.35e-06
rs2869864 chr4:77181939 FAM47E All: C 108,990 15 G vs. A 0.075 (G) 0.442 (G) 1.13 (1.07-1.19) 9 (0-47) 4.35e-06
rs71607346 chr4:77180145 FAM47E All: C 108,990 15 C vs. T 0.075 (C) 0.442 (C) 1.13 (1.07-1.19) 9 (0-46) 4.51e-06
rs13122345 chr4:77179898 FAM47E All: C 108,990 15 T vs. C 0.075 (T) 0.442 (T) 1.13 (1.07-1.19) 8 (0-44) 4.57e-06
rs6851219 chr4:77179830 FAM47E All: C 108,990 15 T vs. C 0.075 (T) 0.442 (T) 1.13 (1.07-1.19) 8 (0-44) 4.59e-06
rs11547135 chr4:77134786 SCARB2 All: C 108,990 15 T vs. C 0.342 (T) 0.35 (C) 1.08 (1.05-1.12) 2 (0-54) 4.62e-06
rs6817492 chr4:77152235 FAM47E All: C 102,085 14 A vs. C 0.175 (A) 0.483 (A) 1.10 (1.06-1.15) 0 (0-51) 6.17e-06
rs4859635 chr4:77151203 FAM47E All: C 108,990 15 C vs. T 0.175 (C) 0.483 (C) 1.09 (1.05-1.14) 0 (0-50) 6.99e-06
rs1948997 chr4:77150723 FAM47E All: C 108,990 15 T vs. C 0.175 (T) 0.483 (T) 1.09 (1.05-1.14) 0 (0-49) 7.16e-06
rs7666265 chr4:77176281 FAM47E C - 13 A vs. G 0.167 (A) 0.2 (G) >1 (-) 6 (-) <1.00e-04
rs62300773 chr4:77164792 FAM47E All: C 108,990 15 T vs. G 0.333 (T) 0.042 (G) 1.08 (1.04-1.11) 0 (0-49) 7.73e-06
rs12640185 chr4:77132360 SCARB2 All: C 108,990 15 C vs. T 0.392 (C) 0.008 (T) 1.08 (1.04-1.11) 0 (0-44) 8.25e-06
rs4859434 chr4:77152706 FAM47E All: C 108,990 15 T vs. C 0.175 (T) 0.483 (T) 1.09 (1.05-1.14) 0 (0-50) 8.29e-06
rs1837867 chr4:77149576 FAM47E All: C 108,990 15 G vs. A 0.158 (G) 0.483 (G) 1.09 (1.05-1.14) 0 (0-48) 8.42e-06
rs6846983 chr4:77151938 FAM47E All: C 108,990 15 C vs. T 0.175 (C) 0.483 (C) 1.09 (1.05-1.14) 0 (0-50) 8.45e-06

Association studies for this region [+]