NUCKS1, chr1:205681947-205719404 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs823118 chr1:205723572 NUCKS1 [+4168bp] All: C 120,238 21 C vs. T 0.45 (C) 0.417 (T) 0.89 (0.87-0.92) 41 (0-65) 1.96e-16
Meta_image?name=rs823118

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs823094 chr1:205689807 NUCKS1 All: C 108,990 15 T vs. G 0.475 (T) - 0.94 (0.91-0.97) 20 (0-57) 8.43e-05
rs6693913 chr1:205654061 SLC45A3 [+4474bp] C - 13 C vs. G 0.308 (C) 0.442 (C) <1 (-) 39 (-) <1.00e-04
rs4951023 chr1:205691546 NUCKS1 C - 13 A vs. G - - <1 (-) 42 (-) <0.05
rs1891091 chr1:205661418 SLC45A3 [+11831bp] C - 13 T vs. C 0.033 (T) 0.358 (T) >1 (-) 55 (-) <0.05
rs951366 chr1:205685352 NUCKS1 C - 13 T vs. C 0.417 (C) 0.433 (C) >1 (-) 43 (-) <0.05
rs11240551 chr1:205641826 SLC45A3 C - 13 C vs. G 0.333 (C) 0.45 (C) <1 (-) 35 (-) <0.05
rs4951258 chr1:205691316 NUCKS1 C - 13 A vs. G - - <1 (-) 42 (-) <0.05
rs12132270 chr1:205660940 SLC45A3 [+11353bp] C - 13 T vs. C 0.033 (T) 0.367 (T) >1 (-) 52 (-) <0.05
rs10900522 chr1:205684067 NUCKS1 All: C 102,085 14 C vs. T 0.283 (C) 0.442 (C) 0.93 (0.89-0.96) 18 (0-56) 1.93e-04
rs1626710 chr1:205727466 NUCKS1 [+8062bp] All: C 108,990 15 C vs. A 0.008 (C) 0.158 (C) 0.85 (0.78-0.93) 2 (0-54) 2.20e-04
rs1772150 chr1:205727468 NUCKS1 [+8064bp] All: C 108,990 15 G vs. A 0.008 (G) 0.183 (G) 0.85 (0.78-0.93) 1 (0-54) 2.27e-04
rs823111 chr1:205701870 NUCKS1 All: C 108,990 15 C vs. T - - 0.94 (0.91-0.97) 18 (0-55) 3.15e-04
rs823106 chr1:205656453 SLC45A3 [+6866bp] C - 13 C vs. G 0.025 (G) 0.367 (G) <1 (-) 48 (-) <0.05
rs823117 chr1:205723513 NUCKS1 [+4109bp] C - 13 A vs. T 0.0 (T) 0.175 (T) >1 (-) 13 (-) <0.05
rs823146 chr1:205732814 RAB7L1 [-4300bp] C - 13 C vs. G 0.008 (C) 0.167 (C) <1 (-) 17 (-) <0.05
rs823126 chr1:205728369 RAB7L1 [-8745bp] C - 13 C vs. G - - <1 (-) 20 (-) <0.05
rs823134 chr1:205737956 RAB7L1 C - 13 C vs. G 0.0 (G) 0.167 (G) >1 (-) 21 (-) <0.05
rs823113 chr1:205711237 NUCKS1 C - 13 C vs. G 0.008 (C) 0.175 (C) <1 (-) 14 (-) <0.05
rs823142 chr1:205741816 RAB7L1 C - 13 A vs. T - 0.167 (A) <1 (-) 15 (-) <0.05
rs11580015 chr1:205676088 NUCKS1 [-5859bp] All: C 108,990 15 G vs. C 0.45 (G) - 0.95 (0.92-0.98) 15 (0-52) 0.001
rs72750964 chr1:205675240 NUCKS1 [-6707bp] All: C 108,990 15 C vs. T 0.425 (C) - 0.95 (0.92-0.98) 14 (0-52) 0.001
rs12737668 chr1:205656024 SLC45A3 [+6437bp] C - 13 C vs. G - - <1 (-) 24 (-) <0.05
rs12404824 chr1:205655820 SLC45A3 [+6233bp] C - 13 C vs. G - 0.192 (G) >1 (-) 22 (-) <0.05
rs823125 chr1:205727821 NUCKS1 [+8417bp] C - 13 C vs. G - - >1 (-) 23 (-) <0.05
rs1772152 chr1:205736662 RAB7L1 [-452bp] C - 13 A vs. T - 0.158 (T) >1 (-) 18 (-) <0.05
rs75506911 chr1:205666272 NUCKS1 [-15675bp] C - 13 T vs. C 0.1 (T) - <1 (-) 34 (-) <0.05
rs6676110 chr1:205662977 SLC45A3 [+13390bp] C - 13 A vs. G 0.108 (A) 0.367 (A) >1 (-) 42 (-) <0.05
rs10751444 chr1:205662144 SLC45A3 [+12557bp] C - 13 T vs. C 0.108 (C) 0.367 (C) <1 (-) 43 (-) <0.05
rs6593964 chr1:205662337 SLC45A3 [+12750bp] C - 13 A vs. C 0.108 (C) 0.367 (C) <1 (-) 42 (-) <0.05
rs140020090 chr1:205681595 NUCKS1 [-352bp] C - 13 C vs. G - - >1 (-) 20 (-) <0.05
rs6685188 chr1:205653756 SLC45A3 [+4169bp] C - 13 T vs. C 0.117 (T) 0.367 (T) >1 (-) 21 (-) <0.05
rs1772136 chr1:205651477 SLC45A3 [+1890bp] C - 13 T vs. C - - <1 (-) 6 (-) <0.05
rs77365272 chr1:205707142 NUCKS1 C - 13 A vs. T 0.15 (A) - <1 (-) 31 (-) <0.05
rs1775153 chr1:205650271 SLC45A3 [+684bp] C - 13 T vs. G 0.133 (T) 0.367 (T) >1 (-) 17 (-) <0.05
rs1418549 chr1:205644848 SLC45A3 C - 13 C vs. G 0.058 (G) 0.367 (G) <1 (-) 50 (-) <0.05
rs4951254 chr1:205642390 SLC45A3 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 51 (-) <0.05
rs823157 chr1:205765795 SLC41A1 C - 13 A vs. T 0.108 (T) 0.242 (T) >1 (-) 15 (-) <0.05
rs823105 chr1:205657570 SLC45A3 [+7983bp] All: C 108,990 15 G vs. A 0.425 (G) - 0.96 (0.93-0.99) 0 (0-49) 0.006
rs141145750 chr1:205726016 NUCKS1 [+6612bp] C - 12 T vs. G - - <1 (-) 29 (-) <0.05
rs2153904 chr1:205642790 SLC45A3 C - 13 T vs. G 0.042 (T) 0.367 (T) >1 (-) 58 (-) <0.05
rs72750963 chr1:205673252 NUCKS1 [-8695bp] C - 10 T vs. C 0.042 (T) - >1 (-) 0 (-) <0.05
rs823095 chr1:205679239 NUCKS1 [-2708bp] C - 13 A vs. G 0.475 (G) - >1 (-) 28 (-) <0.05
rs864783 chr1:205711974 NUCKS1 C - 13 T vs. C 0.475 (T) - <1 (-) 28 (-) <0.05
rs823092 chr1:205687873 NUCKS1 C - 13 A vs. T 0.033 (A) 0.175 (A) <1 (-) 35 (-) <0.05
rs823122 chr1:205725028 NUCKS1 [+5624bp] C - 13 T vs. C 0.025 (C) 0.175 (C) >1 (-) 24 (-) <0.05
rs823097 chr1:205681370 NUCKS1 [-577bp] C - 13 A vs. G 0.475 (G) - >1 (-) 27 (-) <0.05
rs823121 chr1:205724302 NUCKS1 [+4898bp] C - 13 A vs. G 0.475 (G) - >1 (-) 28 (-) <0.05
rs1772148 chr1:205704580 NUCKS1 C - 13 A vs. T 0.475 (A) - <1 (-) 25 (-) <0.05
rs115919272 chr1:205652791 SLC45A3 [+3204bp] C - 9 A vs. G 0.033 (A) - <1 (-) 0 (-) <0.05
rs823143 chr1:205743425 RAB7L1 C - 13 A vs. C 0.483 (A) - <1 (-) 25 (-) <0.05

Association studies for this region [+]