LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17491536 chr12:40735664 LRRK2 C - 13 A vs. G 0.067 (G) - <1 (-) 0 (-) <0.05
rs7973479 chr12:40686323 LRRK2 C - 13 A vs. C 0.45 (A) - <1 (-) 31 (-) <0.05
rs117780447 chr12:40775127 LRRK2 [+12040bp] C - 13 C vs. G 0.017 (C) - >1 (-) 45 (-) <0.05
rs12369882 chr12:40686845 LRRK2 C - 13 A vs. G 0.45 (A) 0.325 (G) <1 (-) 32 (-) <0.05
rs11175911 chr12:40686731 LRRK2 C - 13 A vs. G 0.442 (A) 0.325 (G) <1 (-) 32 (-) <0.05
rs11175922 chr12:40689588 LRRK2 C - 13 T vs. C 0.442 (C) 0.325 (T) >1 (-) 32 (-) <0.05
rs7957754 chr12:40686038 LRRK2 C - 13 T vs. G 0.45 (G) 0.325 (T) >1 (-) 32 (-) <0.05
rs7962011 chr12:40692543 LRRK2 C - 13 T vs. C - - >1 (-) 35 (-) <0.05
rs17443815 chr12:40690061 LRRK2 C - 13 A vs. G 0.45 (A) 0.325 (G) <1 (-) 32 (-) <0.05
rs11564215 chr12:40550073 LRRK2 [-40473bp] C - 13 A vs. C 0.092 (A) - >1 (-) 0 (-) <0.05
rs17444549 chr12:40784851 MUC19 [-2346bp] C - 8 T vs. G 0.033 (G) - >1 (-) 0 (-) <0.05
rs10878452 chr12:40766600 LRRK2 [+3513bp] C - 13 T vs. C 0.075 (T) 0.108 (T) <1 (-) 0 (-) <0.05
rs11564185 chr12:40650717 LRRK2 C - 13 T vs. C - 0.017 (T) >1 (-) 0 (-) <0.05
rs11175847 chr12:40676200 LRRK2 C - 13 T vs. G 0.442 (G) 0.325 (T) >1 (-) 33 (-) <0.05
rs17519846 chr12:40678341 LRRK2 C - 13 T vs. C 0.442 (C) 0.325 (T) >1 (-) 33 (-) <0.05
rs150941518 chr12:40609395 LRRK2 C - 5 T vs. C - - >1 (-) 35 (-) <0.05
rs2046931 chr12:40589107 LRRK2 [-1439bp] C - 13 A vs. G 0.333 (A) 0.342 (A) >1 (-) 5 (-) <0.05
rs7310104 chr12:40588590 LRRK2 [-1956bp] C - 13 A vs. G 0.342 (A) 0.342 (A) >1 (-) 3 (-) <0.05
rs10878208 chr12:40588408 LRRK2 [-2138bp] C - 13 T vs. C 0.342 (T) 0.342 (T) >1 (-) 3 (-) <0.05
rs7309197 chr12:40673260 LRRK2 C - 13 A vs. T 0.45 (T) 0.325 (A) >1 (-) 32 (-) <0.05
rs2638269 chr12:40541197 SLC2A13 [+41306bp] C - 13 T vs. G 0.35 (G) 0.342 (G) <1 (-) 0 (-) <0.05
rs11175546 chr12:40587815 LRRK2 [-2731bp] C - 11 T vs. C 0.05 (C) - <1 (-) 45 (-) <0.05
rs11175845 chr12:40675052 LRRK2 C - 13 A vs. G 0.45 (A) 0.325 (G) <1 (-) 35 (-) <0.05
rs7953143 chr12:40571905 LRRK2 [-18641bp] C - 13 A vs. C 0.1 (A) 0.192 (A) >1 (-) 11 (-) <0.05
rs2638250 chr12:40565161 LRRK2 [-25385bp] C - 13 A vs. C 0.1 (A) 0.358 (A) >1 (-) 52 (-) <0.05
rs1491923 chr12:40591117 LRRK2 C - 13 A vs. G 0.342 (G) 0.342 (G) <1 (-) 1 (-) <0.05
rs147272645 chr12:40675289 LRRK2 C - 10 A vs. G - - <1 (-) 0 (-) <0.05
rs2638244 chr12:40572224 LRRK2 [-18322bp] C - 13 T vs. C 0.333 (T) 0.342 (T) >1 (-) 0 (-) <0.05
rs141591936 chr12:40658478 LRRK2 C - 10 A vs. G - - <1 (-) 0 (-) <0.05
rs4272849 chr12:40670801 LRRK2 C - 13 T vs. C 0.475 (C) 0.325 (T) >1 (-) 37 (-) <0.05
rs2638260 chr12:40548963 LRRK2 [-41583bp] C - 13 T vs. G 0.475 (G) 0.317 (G) >1 (-) 0 (-) <0.05
rs7975693 chr12:40588678 LRRK2 [-1868bp] C - 13 T vs. C 0.1 (T) 0.2 (T) >1 (-) 11 (-) <0.05
rs12368891 chr12:40573814 LRRK2 [-16732bp] C - 13 A vs. G 0.092 (G) - >1 (-) 0 (-) <0.05
rs2638239 chr12:40577696 LRRK2 [-12850bp] C - 13 A vs. T 0.475 (A) 0.325 (A) <1 (-) 0 (-) <0.05
rs11175787 chr12:40660094 LRRK2 C - 13 A vs. C - - >1 (-) 36 (-) <0.05
rs73102746 chr12:40689889 LRRK2 C - 13 T vs. C 0.075 (C) - >1 (-) 0 (-) <0.05
rs7132171 chr12:40649749 LRRK2 C - 13 C vs. G 0.375 (G) 0.367 (C) >1 (-) 0 (-) <0.05
rs7136502 chr12:40617231 LRRK2 C - 7 A vs. G 0.017 (G) - <1 (-) 0 (-) <0.05
rs17465519 chr12:40583821 LRRK2 [-6725bp] C - 13 T vs. C 0.167 (T) - <1 (-) 0 (-) <0.05
rs2708494 chr12:40573474 LRRK2 [-17072bp] C - 13 A vs. C 0.483 (A) 0.342 (A) <1 (-) 0 (-) <0.05
rs11175784 chr12:40659534 LRRK2 C - 13 T vs. C 0.458 (C) 0.325 (T) >1 (-) 34 (-) <0.05
rs17466178 chr12:40682590 LRRK2 C - 13 T vs. G 0.075 (T) - <1 (-) 0 (-) <0.05
rs11564180 chr12:40701271 LRRK2 C - 13 T vs. G 0.067 (T) - <1 (-) 0 (-) <0.05
rs2638266 chr12:40544639 SLC2A13 [+44748bp] C - 13 C vs. G 0.467 (G) 0.333 (G) >1 (-) 0 (-) <0.05
chr12:40639658 chr12:40639658 LRRK2 C - 9 A vs. G - - >1 (-) 13 (-) <0.05
rs2638264 chr12:40546501 LRRK2 [-44045bp] C - 13 A vs. G 0.467 (G) 0.325 (G) >1 (-) 0 (-) <0.05
rs11564150 chr12:40680917 LRRK2 C - 13 T vs. C 0.075 (C) - >1 (-) 0 (-) <0.05
rs4423250 chr12:40715590 LRRK2 C - 13 T vs. C 0.067 (T) - <1 (-) 0 (-) <0.05
rs17466451 chr12:40718693 LRRK2 C - 4 T vs. C - - <1 (-) 27 (-) <0.05
rs2638254 chr12:40557701 LRRK2 [-32845bp] C - 13 T vs. C - - <1 (-) 0 (-) <0.05

Association studies for this region [+]