LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7308720 chr12:40657700 LRRK2 C - 13 C vs. G 0.058 (G) 0.083 (G) >1 (-) 0 (-) <0.05
rs12422796 chr12:40646534 LRRK2 C - 13 A vs. G - - >1 (-) 10 (-) <0.05
rs1491943 chr12:40620416 LRRK2 C - 13 A vs. T 0.058 (T) 0.075 (T) >1 (-) 0 (-) <0.05
rs17466016 chr12:40667663 LRRK2 C - 13 A vs. G - 0.017 (A) >1 (-) 23 (-) <0.05
rs11564271 chr12:40673524 LRRK2 C - 13 A vs. G - 0.025 (G) <1 (-) 34 (-) <0.05
rs73108329 chr12:40661053 LRRK2 C - 13 A vs. T 0.058 (T) 0.092 (T) >1 (-) 0 (-) <0.05
rs139549144 chr12:40618714 LRRK2 C - 13 C vs. G - - <1 (-) 14 (-) <0.05
rs4628750 chr12:40670056 LRRK2 C - 13 A vs. G 0.017 (G) 0.025 (G) <1 (-) 27 (-) <0.05
rs17443407 chr12:40644503 LRRK2 C - 13 T vs. C 0.067 (T) 0.092 (T) <1 (-) 0 (-) <0.05
rs17443414 chr12:40644752 LRRK2 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs149406366 chr12:40621156 LRRK2 C - 13 A vs. G - - >1 (-) 14 (-) <0.05
rs147831725 chr12:40650105 LRRK2 C - 13 A vs. G - - >1 (-) 16 (-) <0.05
rs17461664 chr12:40651972 LRRK2 C - 13 T vs. G 0.017 (T) - >1 (-) 17 (-) <0.05
rs11564209 chr12:40650875 LRRK2 C - 13 A vs. T - 0.025 (T) <1 (-) 17 (-) <0.05
rs150540643 chr12:40622468 LRRK2 C - 13 A vs. C - - >1 (-) 14 (-) <0.05
rs141409298 chr12:40670594 LRRK2 C - 13 A vs. C - - <1 (-) 30 (-) <0.05
rs139528704 chr12:40790740 MUC19 C - 11 T vs. C - - <1 (-) 53 (-) <0.05
rs11564152 chr12:40654873 LRRK2 C - 13 A vs. G - - <1 (-) 19 (-) <0.05
rs11564187 chr12:40634203 LRRK2 C - 13 A vs. G - - <1 (-) 10 (-) <0.05
rs11564210 chr12:40634819 LRRK2 C - 13 T vs. C 0.017 (T) - >1 (-) 10 (-) <0.05
rs11564153 chr12:40634991 LRRK2 C - 13 T vs. C - 0.025 (T) >1 (-) 10 (-) <0.05
rs142436514 chr12:40729781 LRRK2 C - 5 A vs. G - - >1 (-) 40 (-) <0.05
rs11564107 chr12:40609750 LRRK2 C - 13 A vs. G - - <1 (-) 12 (-) <0.05
rs17461575 chr12:40609580 LRRK2 C - 13 T vs. C 0.017 (T) - >1 (-) 12 (-) <0.05
rs17465610 chr12:40593919 LRRK2 C - 13 T vs. C 0.017 (T) - >1 (-) 19 (-) <0.05
rs10506147 chr12:40599398 LRRK2 C - 13 T vs. C - - <1 (-) 17 (-) <0.05
rs1463717 chr12:40647645 LRRK2 C - 13 T vs. G 0.017 (T) - >1 (-) 12 (-) <0.05
rs11175593 chr12:40601940 LRRK2 C - 13 T vs. C 0.017 (T) - >1 (-) 16 (-) <0.05
rs36212067 chr12:40677599 LRRK2 C - 13 A vs. G 0.017 (G) - <1 (-) 37 (-) <0.05
rs4767965 chr12:40592340 LRRK2 C - 13 A vs. G - - >1 (-) 18 (-) <0.05
rs17443206 chr12:40587014 LRRK2 [-3532bp] C - 13 T vs. C - - >1 (-) 12 (-) <0.05
rs17443178 chr12:40586065 LRRK2 [-4481bp] C - 13 A vs. T - - <1 (-) 11 (-) <0.05
rs17442924 chr12:40552165 LRRK2 [-38381bp] C - 13 C vs. G - - >1 (-) 0 (-) <0.05
rs75519193 chr12:40583140 LRRK2 [-7406bp] C - 13 A vs. G - - >1 (-) 12 (-) <0.05
rs147453112 chr12:40559300 LRRK2 [-31246bp] C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs17443154 chr12:40580925 LRRK2 [-9621bp] C - 13 C vs. G 0.017 (C) - >1 (-) 11 (-) <0.05
rs56325408 chr12:40685846 LRRK2 C - 13 T vs. C 0.058 (T) 0.092 (T) <1 (-) 0 (-) <0.05
rs139898997 chr12:40559400 LRRK2 [-31146bp] C - 13 T vs. G - - <1 (-) 0 (-) <0.05
rs73108368 chr12:40677584 LRRK2 C - 13 T vs. G 0.042 (T) 0.117 (T) <1 (-) 0 (-) <0.05
rs7487209 chr12:40812310 MUC19 C - 13 A vs. G 0.008 (A) - >1 (-) 59 (-) <0.05
rs145873901 chr12:40571798 LRRK2 [-18748bp] C - 13 T vs. C - - >1 (-) 6 (-) <0.05
rs11175852 chr12:40677008 LRRK2 C - 13 A vs. G 0.058 (A) 0.1 (A) <1 (-) 0 (-) <0.05
rs149318169 chr12:40564296 LRRK2 [-26250bp] C - 13 A vs. C - - <1 (-) 2 (-) <0.05
rs17443078 chr12:40568798 LRRK2 [-21748bp] C - 13 T vs. C - - <1 (-) 5 (-) <0.05
rs117244963 chr12:40567015 LRRK2 [-23531bp] C - 13 C vs. G 0.017 (C) - >1 (-) 10 (-) <0.05
rs12427245 chr12:40707113 LRRK2 C - 13 A vs. C - - >1 (-) 30 (-) <0.05
rs4768226 chr12:40688497 LRRK2 C - 13 T vs. C - - >1 (-) 32 (-) <0.05
rs12423986 chr12:40803194 MUC19 C - 13 T vs. C - - <1 (-) 59 (-) <0.05
rs146906071 chr12:40700956 LRRK2 C - 13 A vs. G - - >1 (-) 29 (-) <0.05
rs17484342 chr12:40717143 LRRK2 C - 13 A vs. G 0.017 (A) 0.025 (A) >1 (-) 32 (-) <0.05

Association studies for this region [+]