LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2723259 chr12:40600696 LRRK2 All: C 108,990 15 G vs. A 0.325 (G) 0.35 (G) 0.92 (0.89-0.95) 0 (0-51) 2.23e-06
rs17466430 chr12:40718000 LRRK2 All: C 108,990 15 A vs. G 0.158 (A) - 1.11 (1.06-1.16) 0 (0-53) 2.29e-06
rs11564177 chr12:40714332 LRRK2 All: C 108,990 15 C vs. T 0.158 (C) - 1.11 (1.06-1.16) 0 (0-53) 2.38e-06
rs1491932 chr12:40602224 LRRK2 All: C 106,157 14 T vs. G 0.317 (T) 0.342 (T) 0.92 (0.89-0.95) 0 (0-53) 2.71e-06
rs79179868 chr12:40558713 LRRK2 [-31833bp] All: C 108,990 15 A vs. G 0.058 (A) - 1.17 (1.10-1.25) 0 (0-28) 2.81e-06
rs140260911 chr12:40542944 SLC2A13 [+43053bp] All: C 96,250 12 C vs. T - - 0.66 (0.55-0.79) 0 (0-51) 3.18e-06
rs11564175 chr12:40721042 LRRK2 All: C 108,990 15 A vs. G 0.167 (A) - 1.11 (1.06-1.15) 0 (0-48) 3.62e-06
rs115677680 chr12:40562403 LRRK2 [-28143bp] All: C 108,990 15 T vs. C 0.092 (T) - 1.15 (1.08-1.22) 0 (0-53) 4.34e-06
rs17520278 chr12:40726748 LRRK2 All: C 108,990 15 G vs. T 0.167 (G) - 1.11 (1.06-1.15) 5 (0-56) 4.42e-06
rs2638233 chr12:40594722 LRRK2 All: C 108,990 15 C vs. A 0.317 (C) 0.342 (C) 0.92 (0.89-0.96) 0 (0-51) 4.70e-06
rs2708424 chr12:40594570 LRRK2 All: C 108,990 15 C vs. T 0.317 (C) 0.333 (C) 0.92 (0.89-0.96) 0 (0-52) 4.75e-06
rs11829088 chr12:40727779 LRRK2 All: C 108,990 15 G vs. T 0.158 (G) - 1.10 (1.06-1.15) 3 (0-55) 4.80e-06
rs11834950 chr12:40727598 LRRK2 All: C 108,990 15 T vs. C 0.167 (T) - 1.10 (1.06-1.15) 3 (0-55) 4.89e-06
rs117916891 chr12:40564222 LRRK2 [-26324bp] All: C 108,990 15 A vs. G 0.033 (A) - 0.75 (0.66-0.85) 0 (0-24) 4.98e-06
rs10878244 chr12:40631608 LRRK2 All: C 108,990 15 A vs. G 0.217 (A) - 1.10 (1.05-1.14) 0 (0-52) 5.06e-06
rs61007767 chr12:40728298 LRRK2 All: C 108,990 15 G vs. A 0.167 (G) - 1.10 (1.06-1.15) 2 (0-54) 5.07e-06
rs11564267 chr12:40722724 LRRK2 All: C 108,990 15 T vs. C 0.167 (T) - 1.11 (1.06-1.16) 0 (0-44) 5.43e-06
rs11564203 chr12:40724581 LRRK2 All: C 108,990 15 A vs. G 0.158 (A) - 1.10 (1.06-1.15) 5 (0-56) 5.50e-06
rs10506153 chr12:40725571 LRRK2 All: C 108,990 15 C vs. T 0.167 (C) - 1.10 (1.06-1.15) 8 (0-44) 6.20e-06
rs80172174 chr12:40751374 LRRK2 All: C 108,990 15 T vs. C 0.017 (T) - 1.27 (1.14-1.40) 34 (0-65) 6.66e-06
rs6581622 chr12:40634158 LRRK2 All: C 108,990 15 C vs. T 0.267 (C) 0.292 (C) 0.92 (0.89-0.96) 0 (0-35) 6.86e-06
rs10878247 chr12:40632100 LRRK2 All: C 108,990 15 T vs. C 0.267 (T) 0.267 (T) 0.92 (0.89-0.96) 0 (0-27) 7.11e-06
rs58911468 chr12:40741678 LRRK2 All: C 108,990 15 C vs. T 0.117 (C) - 1.12 (1.07-1.18) 0 (0-47) 7.34e-06
rs1388597 chr12:40618097 LRRK2 All: C 108,990 15 G vs. A 0.017 (G) - 1.29 (1.15-1.43) 0 (0-32) 7.63e-06
rs11564146 chr12:40754308 LRRK2 All: C 108,990 15 T vs. C - - 0.79 (0.72-0.88) 44 (0-69) 7.89e-06
rs1365768 chr12:40755215 LRRK2 All: C 108,990 15 G vs. A - - 0.79 (0.72-0.88) 44 (0-69) 8.34e-06
rs1365769 chr12:40755289 LRRK2 All: C 108,990 15 A vs. G - - 0.79 (0.72-0.88) 44 (0-69) 8.35e-06
rs33995883 chr12:40740686 LRRK2 All: C 108,990 15 A vs. G - - 0.78 (0.69-0.87) 35 (0-65) 8.60e-06
rs2708418 chr12:40592225 LRRK2 All: C 108,990 15 A vs. G 0.317 (A) 0.358 (A) 0.93 (0.90-0.96) 0 (0-51) 9.66e-06
rs140812745 chr12:40725258 LRRK2 All: C 108,990 15 T vs. C - - 0.78 (0.69-0.87) 25 (0-60) 1.04e-05
rs11564147 chr12:40739493 LRRK2 All: C 108,990 15 A vs. G 0.125 (A) - 1.11 (1.06-1.16) 0 (0-41) 1.15e-05
rs10506154 chr12:40731013 LRRK2 All: C 108,990 15 G vs. A 0.017 (G) - 1.26 (1.13-1.39) 30 (0-62) 1.16e-05
rs919174 chr12:40736249 LRRK2 All: C 108,990 15 T vs. C 0.117 (T) - 1.11 (1.06-1.16) 0 (0-42) 1.16e-05
rs2708422 chr12:40593676 LRRK2 All: C 108,990 15 T vs. C 0.317 (T) 0.342 (T) 0.93 (0.90-0.96) 0 (0-49) 1.22e-05
rs7305155 chr12:40560628 LRRK2 [-29918bp] All: C 108,990 15 G vs. A 0.092 (G) - 1.13 (1.07-1.20) 0 (0-34) 1.24e-05
rs17458974 chr12:40558264 LRRK2 [-32282bp] All: C 108,990 15 T vs. C 0.083 (T) - 1.13 (1.07-1.20) 0 (0-35) 1.27e-05
rs7305994 chr12:40554056 LRRK2 [-36490bp] All: C 108,990 15 A vs. G 0.092 (A) - 1.13 (1.07-1.20) 0 (0-34) 1.28e-05
rs11564275 chr12:40564051 LRRK2 [-26495bp] All: C 108,990 15 T vs. G 0.092 (T) - 1.13 (1.07-1.20) 0 (0-33) 1.31e-05
rs74501770 chr12:40556157 LRRK2 [-34389bp] All: C 108,990 15 A vs. G 0.092 (A) - 1.13 (1.07-1.20) 0 (0-35) 1.33e-05
rs11564116 chr12:40569777 LRRK2 [-20769bp] All: C 108,990 15 T vs. C 0.092 (T) - 1.13 (1.07-1.20) 0 (0-30) 1.34e-05
rs144202154 chr12:40662691 LRRK2 All: C 108,990 15 A vs. G - - 0.78 (0.70-0.87) 16 (0-53) 1.34e-05
rs17465428 chr12:40568945 LRRK2 [-21601bp] All: C 108,990 15 A vs. G 0.092 (A) - 1.13 (1.07-1.20) 0 (0-30) 1.34e-05
rs2708419 chr12:40592388 LRRK2 All: C 108,990 15 C vs. T 0.317 (C) 0.358 (C) 0.93 (0.90-0.96) 0 (0-52) 1.34e-05
rs28365207 chr12:40616414 LRRK2 All: C 108,990 15 G vs. A 0.058 (G) 0.133 (G) 0.85 (0.79-0.92) 0 (0-29) 1.38e-05
rs1388598 chr12:40616166 LRRK2 All: C 108,990 15 A vs. G 0.058 (A) 0.108 (A) 0.85 (0.79-0.92) 0 (0-29) 1.40e-05
rs17465946 chr12:40658155 LRRK2 All: C 108,990 15 G vs. A - - 0.78 (0.70-0.87) 14 (0-51) 1.40e-05
rs7300065 chr12:40566379 LRRK2 [-24167bp] All: C 108,990 15 A vs. G - - 0.88 (0.84-0.94) 0 (0-32) 1.43e-05
rs7300161 chr12:40566394 LRRK2 [-24152bp] All: C 108,990 15 A vs. G - - 0.88 (0.84-0.94) 0 (0-32) 1.45e-05
rs7959787 chr12:40551073 LRRK2 [-39473bp] All: C 108,990 15 T vs. C 0.092 (T) - 1.13 (1.07-1.20) 0 (0-36) 1.48e-05
rs73277585 chr12:40776457 MUC19 [-10740bp] All: C 108,990 15 G vs. A 0.117 (G) - 1.11 (1.06-1.17) 0 (0-8) 1.49e-05

Association studies for this region [+]