LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17466893 chr12:40784418 MUC19 [-2779bp] All: C 108,990 15 G vs. A - - 0.78 (0.71-0.86) 49 (7-72) 6.80e-07
rs138361990 chr12:40798271 MUC19 All: C 108,990 15 G vs. A - - 0.78 (0.71-0.86) 50 (8-72) 6.91e-07
rs148698440 chr12:40787264 MUC19 All: C 108,990 15 A vs. G - - 0.78 (0.71-0.86) 49 (7-72) 6.96e-07
rs17466907 chr12:40784574 MUC19 [-2623bp] All: C 108,990 15 A vs. G - - 0.78 (0.71-0.86) 49 (7-72) 7.00e-07
rs17444646 chr12:40797205 MUC19 All: C 108,990 15 A vs. G - 0.017 (G) 0.78 (0.71-0.86) 50 (9-72) 7.02e-07
rs117222477 chr12:40789190 MUC19 All: C 108,990 15 A vs. G - 0.008 (G) 0.78 (0.71-0.86) 49 (8-72) 7.16e-07
rs17444626 chr12:40795021 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.71-0.86) 49 (8-72) 7.21e-07
rs12423950 chr12:40787742 MUC19 All: C 108,990 15 G vs. C 0.2 (G) 0.133 (G) 0.91 (0.87-0.94) 20 (0-57) 7.23e-07
rs2708435 chr12:40614656 LRRK2 All: C 108,990 15 A vs. G 0.292 (A) 0.342 (A) 0.92 (0.89-0.95) 0 (0-50) 7.23e-07
rs11564264 chr12:40790530 MUC19 All: C 108,990 15 C vs. T - - 0.78 (0.71-0.86) 49 (8-72) 7.31e-07
rs17443552 chr12:40656677 LRRK2 All: C 108,990 15 A vs. C 0.158 (A) 0.008 (A) 1.12 (1.07-1.17) 4 (0-56) 7.38e-07
rs971616 chr12:40792856 MUC19 All: C 108,990 15 T vs. G - 0.017 (G) 0.78 (0.71-0.86) 49 (8-72) 7.42e-07
rs971617 chr12:40792977 MUC19 All: C 108,990 15 G vs. T - - 0.78 (0.71-0.86) 49 (8-72) 7.43e-07
rs11564262 chr12:40790924 MUC19 All: C 108,990 15 C vs. T - - 0.78 (0.71-0.86) 49 (8-72) 7.46e-07
rs145665119 chr12:40791852 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.71-0.86) 49 (8-72) 7.46e-07
rs3909731 chr12:40791930 MUC19 All: C 108,990 15 C vs. T - - 0.78 (0.71-0.86) 49 (8-72) 7.46e-07
rs11564258 chr12:40792300 MUC19 All: C 108,990 15 G vs. A - - 0.78 (0.71-0.86) 49 (8-72) 7.47e-07
rs3899331 chr12:40794293 MUC19 All: C 108,990 15 C vs. T - - 0.78 (0.71-0.86) 49 (8-72) 7.47e-07
rs117891010 chr12:40753796 LRRK2 All: C 108,990 15 C vs. T 0.017 (C) - 1.35 (1.20-1.52) 21 (0-57) 7.50e-07
rs2017917 chr12:40793899 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.71-0.86) 49 (8-72) 7.54e-07
rs4768251 chr12:40796365 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.71-0.86) 49 (8-72) 7.56e-07
rs4768249 chr12:40796334 MUC19 All: C 108,990 15 T vs. C - - 0.78 (0.71-0.86) 49 (8-72) 7.60e-07
rs144873199 chr12:40797386 MUC19 All: C 108,990 15 A vs. G - - 0.78 (0.71-0.86) 50 (10-73) 8.63e-07
rs17466738 chr12:40772751 LRRK2 [+9664bp] All: C 108,990 15 C vs. T - - 0.79 (0.71-0.87) 45 (0-70) 1.01e-06
rs17466150 chr12:40679254 LRRK2 All: C 108,990 15 A vs. G 0.167 (A) - 1.11 (1.07-1.16) 0 (0-51) 1.02e-06
rs11564274 chr12:40590620 LRRK2 All: C 108,990 15 T vs. C 0.092 (T) - 1.14 (1.08-1.21) 0 (0-24) 1.06e-06
rs117366914 chr12:40772940 LRRK2 [+9853bp] All: C 108,990 15 A vs. C 0.008 (A) - 1.29 (1.16-1.43) 28 (0-61) 1.06e-06
rs1491936 chr12:40650449 LRRK2 All: C 108,990 15 C vs. T 0.167 (C) - 1.12 (1.07-1.17) 0 (0-47) 1.06e-06
rs2638272 chr12:40609883 LRRK2 All: C 108,990 15 G vs. A 0.317 (G) 0.35 (G) 0.92 (0.89-0.95) 0 (0-48) 1.07e-06
rs76180339 chr12:40589206 LRRK2 [-1340bp] All: C 108,990 15 T vs. C 0.092 (T) - 1.14 (1.08-1.21) 0 (0-22) 1.08e-06
rs79139914 chr12:40773602 LRRK2 [+10515bp] All: C 108,990 15 C vs. T - 0.025 (T) 0.79 (0.71-0.87) 45 (0-70) 1.12e-06
rs7970326 chr12:40607891 LRRK2 All: C 108,990 15 C vs. A 0.317 (C) 0.35 (C) 0.92 (0.89-0.95) 0 (0-48) 1.14e-06
rs7973254 chr12:40607766 LRRK2 All: C 108,990 15 C vs. T 0.317 (C) 0.35 (C) 0.92 (0.89-0.95) 0 (0-48) 1.21e-06
rs10878246 chr12:40632099 LRRK2 All: C 108,990 15 G vs. T 0.225 (G) - 1.10 (1.06-1.14) 6 (0-56) 1.25e-06
rs17491061 chr12:40694018 LRRK2 All: C 108,990 15 C vs. T 0.142 (C) 0.008 (C) 1.11 (1.07-1.16) 0 (0-51) 1.27e-06
rs150236143 chr12:40778125 MUC19 [-9072bp] All: C 108,990 15 G vs. T - - 0.79 (0.71-0.87) 46 (2-71) 1.32e-06
rs17519573 chr12:40635356 LRRK2 All: C 108,990 15 A vs. G 0.225 (A) - 1.10 (1.06-1.14) 3 (0-55) 1.32e-06
rs2201141 chr12:40607098 LRRK2 All: C 108,990 15 G vs. A 0.317 (G) 0.358 (G) 0.92 (0.89-0.95) 0 (0-48) 1.32e-06
rs17497325 chr12:40770471 LRRK2 [+7384bp] All: C 108,990 15 T vs. C - - 0.79 (0.71-0.87) 45 (0-70) 1.42e-06
rs146097617 chr12:40574964 LRRK2 [-15582bp] All: C 108,990 15 G vs. A - - 0.88 (0.83-0.92) 0 (0-28) 1.45e-06
rs11564135 chr12:40579481 LRRK2 [-11065bp] All: C 108,990 15 C vs. T 0.092 (C) - 1.14 (1.08-1.21) 0 (0-25) 1.48e-06
rs2263419 chr12:40605916 LRRK2 All: C 108,990 15 A vs. G - - 1.09 (1.05-1.12) 0 (0-48) 1.50e-06
rs4567538 chr12:40621904 LRRK2 All: C 108,990 15 T vs. C 0.3 (T) 0.308 (T) 0.92 (0.89-0.95) 0 (0-51) 1.58e-06
rs3789329 chr12:40760764 LRRK2 All: C 108,990 15 T vs. C - - 0.79 (0.72-0.87) 43 (0-69) 1.69e-06
rs114097337 chr12:40576251 LRRK2 [-14295bp] All: C 108,990 15 T vs. C 0.092 (T) - 1.14 (1.08-1.21) 0 (0-26) 1.70e-06
rs2952711 chr12:40576253 LRRK2 [-14293bp] All: C 108,990 15 G vs. T 0.092 (G) - 1.14 (1.08-1.21) 0 (0-26) 1.70e-06
rs2263420 chr12:40606007 LRRK2 All: C 108,990 15 C vs. T 0.317 (C) 0.367 (C) 0.92 (0.89-0.95) 0 (0-48) 1.76e-06
rs2279535 chr12:40603316 LRRK2 All: C 108,990 15 T vs. C 0.317 (T) 0.342 (T) 0.92 (0.89-0.95) 0 (0-48) 1.77e-06
rs11564205 chr12:40714009 LRRK2 All: C 108,990 15 G vs. A 0.167 (G) - 1.11 (1.06-1.16) 0 (0-53) 1.87e-06
rs11564204 chr12:40715377 LRRK2 All: C 108,990 15 A vs. G 0.167 (A) - 1.11 (1.06-1.16) 0 (0-53) 2.01e-06

Association studies for this region [+]