LRRK2, chr12:40590546-40763087 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs76904798 chr12:40614434 LRRK2 All: C 120,238 21 T vs. C 0.158 (T) - 1.16 (1.11-1.20) 0 (0-47) 4.86e-14
Meta_image?name=rs76904798

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs12423419 chr12:40707501 LRRK2 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs10784407 chr12:40552700 LRRK2 [-37846bp] C - 13 A vs. G 0.167 (A) 0.333 (A) <1 (-) 0 (-) >0.05
rs10467147 chr12:40767362 LRRK2 [+4275bp] C - 13 A vs. G 0.358 (A) 0.308 (A) >1 (-) 0 (-) >0.05
rs721713 chr12:40709185 LRRK2 C - 11 A vs. G 0.375 (A) 0.433 (G) <1 (-) 12 (-) >0.05
rs7966550 chr12:40688695 LRRK2 C - 13 T vs. C 0.1 (C) 0.117 (C) <1 (-) 19 (-) >0.05
rs11176274 chr12:40767689 LRRK2 [+4602bp] C - 13 T vs. C 0.383 (T) 0.308 (T) >1 (-) 0 (-) >0.05
rs11176360 chr12:40775567 MUC19 [-11630bp] C - 13 T vs. C 0.392 (T) 0.308 (T) <1 (-) 16 (-) >0.05
rs11609433 chr12:40764769 LRRK2 [+1682bp] C - 13 T vs. G 0.383 (G) 0.308 (G) <1 (-) 0 (-) >0.05
rs10878161 chr12:40546554 LRRK2 [-43992bp] C - 12 T vs. C 0.175 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs61475818 chr12:40801496 MUC19 C - 13 T vs. C 0.092 (T) 0.25 (T) <1 (-) 45 (-) >0.05
rs2638271 chr12:40541034 SLC2A13 [+41143bp] C - 13 C vs. G 0.258 (C) 0.342 (C) <1 (-) 15 (-) >0.05
rs10878160 chr12:40546446 LRRK2 [-44100bp] C - 12 A vs. G 0.175 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs17465898 chr12:40656164 LRRK2 C - 13 A vs. G 0.033 (G) - <1 (-) 36 (-) >0.05
rs17443607 chr12:40658964 LRRK2 C - 13 T vs. G 0.042 (T) - <1 (-) 0 (-) >0.05
rs2638268 chr12:40541236 SLC2A13 [+41345bp] C - 13 A vs. C 0.25 (C) 0.342 (C) >1 (-) 14 (-) >0.05
rs17461720 chr12:40660487 LRRK2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs7959481 chr12:40812764 MUC19 C - 13 A vs. G 0.075 (A) 0.283 (A) <1 (-) 0 (-) >0.05
rs76033741 chr12:40685285 LRRK2 C - 13 T vs. C 0.092 (T) - >1 (-) 10 (-) >0.05
rs11175843 chr12:40674039 LRRK2 C - 13 C vs. G 0.167 (C) 0.2 (C) >1 (-) 43 (-) >0.05
rs11613829 chr12:40784253 MUC19 [-2944bp] C - 13 A vs. G 0.092 (G) - >1 (-) 44 (-) >0.05
rs17465870 chr12:40653713 LRRK2 C - 13 T vs. C 0.208 (T) 0.05 (T) <1 (-) 0 (-) >0.05
rs2162471 chr12:40737832 LRRK2 C - 13 T vs. C 0.167 (C) 0.217 (C) <1 (-) 48 (-) >0.05
rs2708463 chr12:40543454 SLC2A13 [+43563bp] C - 13 A vs. G 0.267 (G) 0.342 (G) >1 (-) 14 (-) >0.05
rs7137173 chr12:40766822 LRRK2 [+3735bp] C - 13 A vs. G 0.167 (A) 0.233 (A) <1 (-) 53 (-) >0.05
rs11175934 chr12:40693801 LRRK2 C - 13 C vs. G 0.167 (G) 0.15 (G) >1 (-) 43 (-) >0.05
rs35303786 chr12:40713899 LRRK2 C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs17462055 chr12:40751770 LRRK2 C - 13 A vs. G 0.167 (G) 0.225 (G) <1 (-) 51 (-) >0.05
rs11175935 chr12:40693806 LRRK2 C - 13 T vs. G 0.167 (T) 0.167 (T) <1 (-) 43 (-) >0.05
rs144408122 chr12:40650052 LRRK2 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs10437933 chr12:40550831 LRRK2 [-39715bp] C - 13 T vs. C 0.175 (C) 0.333 (C) <1 (-) 0 (-) >0.05
rs11176118 chr12:40737471 LRRK2 C - 13 A vs. T 0.167 (A) 0.233 (A) >1 (-) 50 (-) >0.05
rs10878307 chr12:40671989 LRRK2 C - 12 A vs. G 0.1 (G) 0.025 (G) >1 (-) 10 (-) >0.05
rs77815501 chr12:40805973 MUC19 C - 11 A vs. G 0.008 (G) - <1 (-) 47 (-) >0.05
rs10784470 chr12:40663596 LRRK2 C - 13 T vs. G 0.358 (T) 0.325 (T) <1 (-) 26 (-) >0.05
rs10878466 chr12:40771431 LRRK2 [+8344bp] C - 13 A vs. G 0.167 (G) 0.225 (G) >1 (-) 53 (-) >0.05
rs12146857 chr12:40663918 LRRK2 C - 13 C vs. G 0.367 (G) 0.325 (G) >1 (-) 26 (-) >0.05
rs12368229 chr12:40747462 LRRK2 C - 13 A vs. C - - >1 (-) 51 (-) >0.05

Association studies for this region [+]