GAK, chr4:843064-926161 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34311866 chr4:951947 TMEM175 All: C 120,238 21 C vs. T 0.15 (C) 0.075 (C) 1.26 (1.22-1.31) 52 (21-71) 6.00e-41
Meta_image?name=rs34311866

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11248042 chr4:812598 CPLX1 All: C 108,990 15 C vs. T 0.35 (C) 0.458 (T) 1.07 (1.04-1.11) 21 (0-57) 3.31e-05
rs73207790 chr4:865430 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.275 (A) 1.09 (1.05-1.14) 12 (0-50) 3.39e-05
rs6829197 chr4:971021 DGKQ C - 12 C vs. G 0.183 (C) 0.283 (C) >1 (-) 15 (-) <1.00e-04
rs7684266 chr4:856609 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.275 (C) 1.09 (1.05-1.14) 14 (0-52) 5.13e-05
rs12509561 chr4:850701 GAK All: C 108,990 15 T vs. C 0.158 (T) 0.267 (T) 1.09 (1.05-1.14) 14 (0-52) 5.51e-05
rs4690340 chr4:848280 GAK All: C 108,990 15 T vs. G 0.158 (T) 0.267 (T) 1.09 (1.05-1.14) 14 (0-52) 5.55e-05
rs2335172 chr4:855282 GAK All: C 108,990 15 A vs. G 0.158 (A) - 1.09 (1.04-1.13) 16 (0-53) 5.69e-05
rs2279175 chr4:852013 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.267 (A) 1.09 (1.04-1.14) 14 (0-52) 5.85e-05
rs2061846 chr4:852484 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.267 (C) 1.09 (1.04-1.13) 15 (0-53) 6.00e-05
rs17165051 chr4:813428 CPLX1 All: C 108,990 15 T vs. G 0.425 (T) 0.267 (T) 0.94 (0.91-0.97) 0 (0-35) 6.23e-05
rs56307842 chr4:854232 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.25 (C) 1.09 (1.04-1.13) 15 (0-52) 6.47e-05
rs17165087 chr4:845841 GAK All: C 108,990 15 T vs. C 0.167 (T) 0.3 (T) 1.09 (1.05-1.14) 16 (0-53) 6.49e-05
rs76638961 chr4:831852 GAK [-11212bp] All: C 105,041 14 C vs. A 0.042 (C) - 0.81 (0.73-0.90) 49 (5-72) 7.31e-05
rs3733353 chr4:861439 GAK All: C 108,990 15 A vs. G 0.15 (A) 0.275 (A) 1.09 (1.04-1.13) 13 (0-51) 8.41e-05
rs62295466 chr4:835425 GAK [-7639bp] All: C 105,041 14 G vs. T - - 0.88 (0.82-0.94) 0 (-) 9.99e-05
rs56039006 chr4:954741 DGKQ C - 12 C vs. G 0.117 (G) 0.2 (G) <1 (-) 7 (-) <0.05
rs3775115 chr4:897013 GAK C - 12 A vs. G 0.433 (G) 0.233 (G) >1 (-) 35 (-) <0.05
rs60018246 chr4:799988 CPLX1 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs62295555 chr4:848163 GAK All: C 105,041 14 T vs. C 0.067 (T) - 0.87 (0.81-0.94) 0 (0-55) 2.16e-04
rs79772189 chr4:841438 GAK [-1626bp] All: C 105,041 14 T vs. G 0.058 (T) 0.058 (T) 1.13 (1.06-1.20) 0 (-) 2.23e-04
rs11736866 chr4:831181 CPLX1 [+11195bp] C - 13 A vs. G 0.15 (A) 0.083 (A) >1 (-) 35 (-) <0.05
rs17165034 chr4:798962 CPLX1 C - 13 A vs. G 0.367 (A) 0.192 (A) <1 (-) 0 (-) <0.05
rs11724278 chr4:794564 CPLX1 C - 13 C vs. G - - <1 (-) 0 (-) <0.05
rs11729160 chr4:794639 CPLX1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs6823196 chr4:816451 CPLX1 C - 13 C vs. G 0.383 (C) 0.208 (C) <1 (-) 0 (-) <0.05
rs116272755 chr4:901804 GAK C - 12 T vs. C 0.025 (T) - >1 (-) 28 (-) <0.05
rs73207757 chr4:796308 CPLX1 All: C 108,990 15 C vs. T 0.367 (C) 0.208 (C) 0.94 (0.91-0.97) 0 (0-49) 5.17e-04
rs73207767 chr4:824489 CPLX1 [+4503bp] C - 13 T vs. C 0.383 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs10155482 chr4:816921 CPLX1 C - 13 A vs. C 0.383 (C) 0.217 (C) >1 (-) 0 (-) <0.05
rs6842106 chr4:816304 CPLX1 C - 13 C vs. G 0.383 (G) 0.2 (G) >1 (-) 0 (-) <0.05
rs11942504 chr4:817486 CPLX1 C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs6817287 chr4:815856 CPLX1 C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs58854368 chr4:821421 CPLX1 [+1435bp] C - 13 T vs. G 0.383 (G) 0.208 (G) >1 (-) 0 (-) <0.05
rs6599383 chr4:814605 CPLX1 C - 13 T vs. C 0.375 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs7378189 chr4:823304 CPLX1 [+3318bp] C - 13 T vs. C 0.383 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs2276906 chr4:818440 CPLX1 C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs7375209 chr4:815039 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs7376916 chr4:823743 CPLX1 [+3757bp] C - 13 A vs. G 0.383 (A) 0.208 (A) <1 (-) 0 (-) <0.05
rs7378224 chr4:823629 CPLX1 [+3643bp] C - 13 T vs. C 0.383 (T) 0.208 (T) <1 (-) 0 (-) <0.05
rs6599381 chr4:814313 CPLX1 C - 13 T vs. G 0.375 (T) 0.208 (T) <1 (-) 5 (-) <0.05
rs28437588 chr4:816646 CPLX1 C - 13 T vs. G 0.383 (G) 0.208 (G) >1 (-) 0 (-) <0.05
rs6599382 chr4:814404 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 5 (-) <0.05
rs12504575 chr4:813438 CPLX1 C - 13 A vs. G 0.425 (A) 0.3 (A) <1 (-) 0 (-) <0.05
rs6599380 chr4:812414 CPLX1 C - 13 T vs. C 0.375 (T) 0.208 (T) <1 (-) 6 (-) <0.05
rs7686544 chr4:812417 CPLX1 C - 13 A vs. G 0.367 (A) 0.208 (A) <1 (-) 6 (-) <0.05
rs9328757 chr4:809593 CPLX1 C - 13 A vs. G 0.375 (A) 0.208 (A) <1 (-) 6 (-) <0.05
rs10004503 chr4:793929 CPLX1 C - 12 T vs. C 0.1 (T) 0.108 (T) >1 (-) 42 (-) <0.05
rs28699255 chr4:826998 CPLX1 [+7012bp] C - 13 A vs. G 0.342 (A) 0.2 (A) <1 (-) 0 (-) <0.05
rs76984010 chr4:794832 CPLX1 C - 12 A vs. G - - >1 (-) 41 (-) <0.05
rs1078140 chr4:828426 CPLX1 [+8440bp] C - 13 T vs. C 0.375 (T) 0.183 (T) <1 (-) 0 (-) <0.05

Association studies for this region [+]