FAM47E, chr4:77135193-77204933 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6812193 chr4:77198986 FAM47E All: C 120,238 21 T vs. C 0.392 (T) 0.092 (T) 0.91 (0.88-0.93) 36 (0-62) 1.85e-11
Meta_image?name=rs6812193

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs139764164 chr4:77203238 FAM47E C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs78586494 chr4:77204570 FAM47E C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs72655528 chr4:77085384 SCARB2 C - 5 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs12501795 chr4:77163130 FAM47E C - 12 A vs. G 0.208 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs116331834 chr4:77103464 SCARB2 C - 9 T vs. C 0.008 (C) - <1 (-) 8 (-) >0.05
rs4859645 chr4:77165893 FAM47E C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs2904216 chr4:77162824 FAM47E C - 12 A vs. G 0.2 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs143699909 chr4:77087389 SCARB2 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs28459239 chr4:77166493 FAM47E C - 13 A vs. G - - >1 (-) 13 (-) >0.05
rs9994282 chr4:77112912 SCARB2 C - 13 T vs. C 0.333 (T) 0.05 (C) >1 (-) 0 (-) >0.05
rs61740422 chr4:77177415 FAM47E C - 13 T vs. C 0.033 (T) - >1 (-) 0 (-) >0.05
rs6837841 chr4:77169256 FAM47E C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs10446680 chr4:77163276 FAM47E C - 13 T vs. C 0.125 (C) 0.1 (C) <1 (-) 12 (-) >0.05
rs11097296 chr4:77153735 FAM47E C - 13 C vs. G 0.125 (C) 0.1 (C) >1 (-) 20 (-) >0.05
rs12505005 chr4:77149119 FAM47E C - 13 T vs. C 0.067 (C) 0.008 (C) <1 (-) 0 (-) >0.05
rs139008362 chr4:77210630 FAM47E-STBD1 C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs56371028 chr4:77173476 FAM47E C - 13 T vs. C 0.108 (T) 0.058 (T) >1 (-) 20 (-) >0.05
rs1348206 chr4:77167242 FAM47E C - 13 A vs. G 0.125 (A) 0.1 (A) >1 (-) 13 (-) >0.05
rs1441906 chr4:77167713 FAM47E C - 13 T vs. C 0.125 (C) 0.1 (C) <1 (-) 14 (-) >0.05
rs1372408 chr4:77171728 FAM47E C - 13 A vs. G 0.192 (G) 0.092 (G) <1 (-) 0 (-) >0.05
rs7657929 chr4:77171957 FAM47E C - 13 T vs. G 0.192 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs894251 chr4:77129840 SCARB2 C - 13 A vs. G 0.075 (A) 0.367 (A) >1 (-) 14 (-) >0.05
rs145996692 chr4:77169786 FAM47E C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs28718095 chr4:77175112 FAM47E C - 13 A vs. G 0.125 (G) 0.1 (G) <1 (-) 22 (-) >0.05
rs144995498 chr4:77120993 SCARB2 C - 12 T vs. C - - <1 (-) 21 (-) >0.05
rs138275602 chr4:77169303 FAM47E C - 13 A vs. G - - >1 (-) 19 (-) >0.05
rs4859647 chr4:77173299 FAM47E C - 13 T vs. C 0.192 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs116163997 chr4:77175778 FAM47E C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs1441908 chr4:77172595 FAM47E C - 13 T vs. C 0.2 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs28451202 chr4:77130707 SCARB2 C - 11 A vs. C - - >1 (-) 28 (-) >0.05
rs6824953 chr4:77110311 SCARB2 C - 13 C vs. G 0.317 (G) 0.308 (C) <1 (-) 0 (-) >0.05
rs17234715 chr4:77130934 SCARB2 C - 13 T vs. C 0.283 (C) - <1 (-) 5 (-) >0.05
rs116762605 chr4:77187223 FAM47E C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs4859643 chr4:77164549 FAM47E C - 13 C vs. G 0.325 (C) 0.475 (G) <1 (-) 26 (-) >0.05
rs4859642 chr4:77164468 FAM47E C - 13 A vs. C 0.325 (A) 0.475 (C) <1 (-) 26 (-) >0.05
rs1596118 chr4:77161299 FAM47E C - 13 T vs. C 0.067 (T) - >1 (-) 0 (-) >0.05
rs768981 chr4:77194473 FAM47E C - 13 A vs. G 0.275 (G) 0.45 (G) >1 (-) 38 (-) >0.05
chr4:77222383 chr4:77222383 FAM47E-STBD1 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs143052491 chr4:77153836 FAM47E C - 12 T vs. C - - <1 (-) 6 (-) >0.05
rs77630789 chr4:77243257 CCDC158 C - 7 T vs. C 0.075 (C) - <1 (-) 31 (-) >0.05
rs12331583 chr4:77155240 FAM47E C - 13 C vs. G 0.125 (G) 0.108 (G) <1 (-) 15 (-) >0.05
rs6814385 chr4:77155193 FAM47E C - 13 A vs. C 0.125 (A) 0.1 (A) >1 (-) 15 (-) >0.05
rs149094066 chr4:77121203 SCARB2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs139128109 chr4:77165605 FAM47E C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs142234430 chr4:77115087 SCARB2 C - 12 T vs. C - - <1 (-) 56 (-) >0.05
rs143670970 chr4:77148271 FAM47E C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs12498798 chr4:77168112 FAM47E C - 13 T vs. C 0.067 (C) - <1 (-) 0 (-) >0.05
rs894250 chr4:77129908 SCARB2 C - 13 A vs. C 0.408 (A) 0.017 (C) >1 (-) 27 (-) >0.05
rs12499643 chr4:77168321 FAM47E C - 13 A vs. T 0.067 (A) - >1 (-) 0 (-) >0.05
rs142588499 chr4:77175335 FAM47E C - 10 T vs. G - - >1 (-) 0 (-) >0.05

Association studies for this region [+]