CCDC62, chr12:123258874-123312075 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11060180 chr12:123303586 CCDC62 All: C 105,818 17 G vs. A 0.483 (G) 0.208 (G) 0.91 (0.88-0.93) 21 (0-56) 3.08e-11
Meta_image?name=rs11060180

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11060180 chr12:123303586 CCDC62 All: C 105,818 17 G vs. A 0.483 (G) 0.208 (G) 0.91 (0.88-0.93) 21 (0-56) 3.08e-11
rs12820345 chr12:123320579 HIP1R All: C 94,570 11 G vs. T 0.35 (G) - 1.14 (1.09-1.20) 37 (0-69) 5.80e-08
rs10847864 chr12:123326598 HIP1R All: C 28,406 9 T vs. G 0.275 (T) 0.458 (G) 1.19 (1.11-1.27) 43 (0-74) 6.63e-07
rs12817488 chr12:123296294 CCDC62 C - 8 A vs. G - - >1 (-) 46 (-) <1.00e-04
rs11060212 chr12:123310521 CCDC62 C - 9 C vs. G - - >1 (-) 56 (-) <1.00e-04
rs2245611 chr12:123223330 HCAR1 [+7940bp] C - 10 T vs. C 0.35 (T) 0.142 (T) <1 (-) 37 (-) <0.05
rs7967318 chr12:123270798 CCDC62 C - 8 T vs. C - - >1 (-) 21 (-) <0.05
rs10773547 chr12:123236499 DENR [-822bp] C - 10 A vs. G 0.433 (A) 0.425 (A) >1 (-) 0 (-) <0.05
rs11060112 chr12:123292503 CCDC62 C - 8 A vs. C 0.308 (C) 0.2 (C) >1 (-) 57 (-) <0.05
rs7131790 chr12:123212123 HCAR1 C - 12 T vs. G - - >1 (-) 2 (-) <0.05
rs7307192 chr12:123212108 HCAR1 C - 12 C vs. G - - >1 (-) 2 (-) <0.05
rs7313367 chr12:123212236 HCAR1 C - 12 A vs. G - - >1 (-) 2 (-) <0.05
rs7131791 chr12:123212740 HCAR1 C - 12 A vs. G 0.408 (G) 0.075 (G) >1 (-) 1 (-) <0.05
rs10773516 chr12:123211401 HCAR1 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs10773515 chr12:123211327 HCAR1 C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs6489237 chr12:123208929 HCAR1 C - 13 T vs. C 0.408 (T) 0.075 (T) <1 (-) 0 (-) <0.05
rs4759368 chr12:123220549 HCAR1 [+5159bp] C - 11 A vs. G 0.367 (G) - <1 (-) 0 (-) <0.05
rs11059650 chr12:123219785 HCAR1 [+4395bp] C - 11 T vs. C 0.367 (T) 0.317 (T) >1 (-) 0 (-) <0.05
rs33930522 chr12:123216263 HCAR1 [+873bp] C - 8 T vs. C - - <1 (-) 0 (-) <0.05
rs496911 chr12:123216469 HCAR1 [+1079bp] C - 12 A vs. G 0.475 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs34623699 chr12:123220416 HCAR1 [+5026bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs2649896 chr12:123238797 DENR All: C 105,041 14 A vs. G 0.1 (A) - 0.94 (0.88-1.01) 0 (-) 0.108
rs1260121 chr12:123246355 DENR All: C 108,990 15 G vs. A 0.1 (G) 0.008 (G) 0.95 (0.88-1.01) 0 (-) 0.113
rs2656812 chr12:123244984 DENR All: C 108,990 15 C vs. A 0.092 (C) 0.008 (C) 0.95 (0.88-1.01) 0 (-) 0.113
rs839356 chr12:123251637 DENR All: C 108,990 15 C vs. A 0.092 (C) 0.017 (C) 0.95 (0.89-1.01) 0 (-) 0.117
rs2343109 chr12:123341863 HIP1R C - 13 C vs. G 0.117 (G) 0.292 (G) >1 (-) 0 (-) >0.05
rs839354 chr12:123265410 CCDC62 All: C 108,990 15 C vs. T 0.092 (C) 0.0 (C) 0.95 (0.89-1.02) 0 (-) 0.128
rs3825143 chr12:123352179 VPS37B C - 13 T vs. C 0.125 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs1587856 chr12:123342229 HIP1R C - 13 A vs. G 0.117 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs525017 chr12:123215734 HCAR1 [+344bp] C - 9 T vs. C 0.092 (T) 0.083 (T) >1 (-) 0 (-) >0.05
rs527902 chr12:123215410 HCAR1 [+20bp] C - 9 T vs. C 0.083 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs2061101 chr12:123348925 VPS37B [-957bp] C - 13 A vs. C 0.117 (C) 0.225 (C) >1 (-) 0 (-) >0.05
rs2061098 chr12:123349410 VPS37B [-472bp] C - 13 T vs. C 0.125 (T) 0.217 (T) <1 (-) 0 (-) >0.05
rs7972447 chr12:123354545 VPS37B C - 13 C vs. G 0.117 (C) 0.208 (C) <1 (-) 0 (-) >0.05
rs3817094 chr12:123332032 HIP1R C - 10 T vs. C 0.117 (T) 0.308 (T) <1 (-) 0 (-) >0.05
rs897385 chr12:123341297 HIP1R C - 13 A vs. G 0.117 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs2649914 chr12:123257352 CCDC62 [-1522bp] C - 13 A vs. G 0.1 (A) 0.0 (A) <1 (-) 0 (-) >0.05
rs839361 chr12:123277213 CCDC62 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs4759381 chr12:123348480 HIP1R [+973bp] C - 13 A vs. G 0.117 (G) 0.292 (G) >1 (-) 0 (-) >0.05
rs11060208 chr12:123309422 CCDC62 C - 3 A vs. G - - <1 (-) 41 (-) >0.05
rs11060406 chr12:123339117 HIP1R C - 4 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs3852537 chr12:123361501 VPS37B C - 13 T vs. C 0.117 (T) 0.292 (T) <1 (-) 0 (-) >0.05
rs839355 chr12:123260285 CCDC62 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs2292139 chr12:123345090 HIP1R C - 13 A vs. G - 0.283 (A) <1 (-) 0 (-) >0.05
rs74985067 chr12:123354980 VPS37B C - 13 A vs. G - 0.192 (A) <1 (-) 0 (-) >0.05
rs12255 chr12:123350204 VPS37B C - 13 T vs. C 0.117 (C) 0.292 (C) >1 (-) 0 (-) >0.05
rs76137672 chr12:123345787 HIP1R C - 13 A vs. G - 0.258 (A) <1 (-) 0 (-) >0.05
rs513567 chr12:123213236 HCAR1 C - 9 A vs. G 0.142 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs4759382 chr12:123347609 HIP1R [+102bp] C - 13 A vs. G 0.117 (A) 0.292 (A) <1 (-) 0 (-) >0.05
rs1696348 chr12:123211817 HCAR1 C - 9 A vs. G 0.1 (A) 0.117 (A) >1 (-) 0 (-) >0.05

Association studies for this region [+]