LAMP3, chr3:182840001-182881627 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11711441 chr3:182821275 MCCC1 All: C 108,990 15 A vs. G 0.2 (A) 0.25 (A) 0.83 (0.79-0.87) 0 (0-53) 2.54e-14
Meta_image?name=rs11711441

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6806390 chr3:182791710 MCCC1 C - 13 A vs. G 0.058 (A) 0.0 (A) >1 (-) 11 (-) >0.05
rs514636 chr3:182870436 LAMP3 C - 13 A vs. G 0.1 (G) 0.092 (G) <1 (-) 25 (-) >0.05
rs6775326 chr3:182870779 LAMP3 C - 13 A vs. T - - <1 (-) 25 (-) >0.05
rs7615011 chr3:182837466 LAMP3 [-2535bp] C - 13 A vs. G - - <1 (-) 42 (-) >0.05
rs483150 chr3:182869247 LAMP3 C - 13 T vs. C - - >1 (-) 25 (-) >0.05
rs6762591 chr3:182870916 LAMP3 C - 13 T vs. C - - <1 (-) 25 (-) >0.05
rs6414495 chr3:182871055 LAMP3 C - 13 A vs. C 0.1 (C) 0.092 (C) <1 (-) 25 (-) >0.05
rs6414496 chr3:182871122 LAMP3 C - 13 A vs. G 0.108 (A) 0.092 (A) >1 (-) 25 (-) >0.05
rs7427761 chr3:182864403 LAMP3 C - 13 T vs. C - - >1 (-) 21 (-) >0.05
rs77775631 chr3:182796086 MCCC1 C - 13 C vs. G 0.033 (C) 0.142 (C) >1 (-) 32 (-) >0.05
rs80083845 chr3:182794727 MCCC1 C - 13 T vs. C 0.033 (C) 0.142 (C) <1 (-) 32 (-) >0.05
rs683395 chr3:182869818 LAMP3 C - 13 A vs. G 0.1 (G) 0.092 (G) <1 (-) 25 (-) >0.05
rs6443849 chr3:182790643 MCCC1 C - 13 T vs. G 0.075 (T) - >1 (-) 16 (-) >0.05
rs1995427 chr3:182792498 MCCC1 C - 13 A vs. C 0.075 (C) - <1 (-) 10 (-) >0.05
chr3:182814014 chr3:182814014 MCCC1 C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs143764787 chr3:182821214 MCCC1 C - 13 A vs. G - - <1 (-) 25 (-) >0.05
rs4859277 chr3:182820349 MCCC1 C - 13 C vs. G 0.025 (C) - >1 (-) 18 (-) >0.05
rs7626523 chr3:182837460 LAMP3 [-2541bp] C - 13 T vs. C - - >1 (-) 43 (-) >0.05
rs11712267 chr3:182794135 MCCC1 C - 13 A vs. G 0.067 (A) 0.0 (A) >1 (-) 10 (-) >0.05
rs2134428 chr3:182832506 MCCC1 C - 13 T vs. C 0.075 (T) 0.208 (T) >1 (-) 44 (-) >0.05
rs589445 chr3:182868995 LAMP3 C - 13 A vs. G 0.1 (G) 0.092 (G) <1 (-) 27 (-) >0.05
rs591614 chr3:182868542 LAMP3 C - 13 A vs. G 0.1 (G) 0.092 (G) <1 (-) 27 (-) >0.05
rs591618 chr3:182868534 LAMP3 C - 13 A vs. G 0.117 (A) 0.092 (A) >1 (-) 27 (-) >0.05
rs1995426 chr3:182792195 MCCC1 C - 13 A vs. G 0.058 (G) 0.0 (G) <1 (-) 8 (-) >0.05
rs488897 chr3:182860589 LAMP3 C - 13 C vs. G 0.067 (C) 0.217 (C) >1 (-) 28 (-) >0.05
rs529055 chr3:182899008 MCF2L2 C - 13 A vs. G 0.1 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs114830081 chr3:182819077 MCCC1 C - 13 A vs. G - 0.075 (A) >1 (-) 27 (-) >0.05
rs6414498 chr3:182871214 LAMP3 C - 13 T vs. G 0.1 (T) 0.092 (T) >1 (-) 25 (-) >0.05
rs9812846 chr3:182801324 MCCC1 C - 13 T vs. G 0.067 (G) 0.0 (G) <1 (-) 11 (-) >0.05
rs6414497 chr3:182871166 LAMP3 C - 13 T vs. G 0.125 (G) 0.092 (G) <1 (-) 25 (-) >0.05
rs6443856 chr3:182880111 LAMP3 C - 13 A vs. G 0.133 (A) 0.075 (A) >1 (-) 2 (-) >0.05
rs12491196 chr3:182803532 MCCC1 C - 13 T vs. C 0.058 (T) 0.0 (T) >1 (-) 12 (-) >0.05
rs140599999 chr3:182828301 MCCC1 C - 13 A vs. C - - >1 (-) 27 (-) >0.05
rs599501 chr3:182861730 LAMP3 C - 13 A vs. G 0.092 (G) 0.225 (G) <1 (-) 45 (-) >0.05
rs78297829 chr3:182790530 MCCC1 C - 13 A vs. C 0.025 (A) 0.142 (A) >1 (-) 31 (-) >0.05
rs116293423 chr3:182868138 LAMP3 C - 4 A vs. G 0.008 (A) - >1 (-) 22 (-) >0.05
rs602762 chr3:182880629 LAMP3 C - 13 A vs. C 0.133 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs7611168 chr3:182805804 MCCC1 C - 13 T vs. C 0.067 (C) 0.0 (C) <1 (-) 13 (-) >0.05
rs13088121 chr3:182877413 LAMP3 C - 13 T vs. C 0.217 (T) 0.425 (T) >1 (-) 21 (-) >0.05
rs625677 chr3:182873502 LAMP3 C - 13 A vs. T 0.108 (A) 0.083 (A) >1 (-) 29 (-) >0.05
rs7631640 chr3:182883408 LAMP3 [+1781bp] C - 13 A vs. G 0.083 (G) 0.008 (G) <1 (-) 14 (-) >0.05
rs528999 chr3:182856129 LAMP3 C - 13 A vs. C 0.067 (C) 0.217 (C) <1 (-) 31 (-) >0.05
rs7619012 chr3:182879349 LAMP3 C - 13 T vs. C - - <1 (-) 2 (-) >0.05
rs501037 chr3:182835191 MCCC1 [+1328bp] C - 13 C vs. G 0.067 (G) 0.233 (G) <1 (-) 44 (-) >0.05
rs636008 chr3:182835190 MCCC1 [+1327bp] C - 13 T vs. C 0.067 (T) 0.208 (T) >1 (-) 44 (-) >0.05
rs75679834 chr3:182913547 MCF2L2 C - 4 A vs. C 0.017 (A) - >1 (-) 0 (-) >0.05
rs633725 chr3:182850258 LAMP3 C - 13 T vs. C 0.067 (C) 0.208 (C) <1 (-) 32 (-) >0.05
rs633815 chr3:182850316 LAMP3 C - 13 A vs. G 0.067 (A) 0.217 (A) >1 (-) 32 (-) >0.05
rs550991 chr3:182848237 LAMP3 C - 13 T vs. C 0.083 (T) 0.208 (T) >1 (-) 33 (-) >0.05
rs7630494 chr3:182849115 LAMP3 C - 13 T vs. C 0.05 (T) 0.0 (T) >1 (-) 33 (-) >0.05

Association studies for this region [+]